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L2_023_000G1_scaffold_2003

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2003_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..715
DNA (714bp) protein (238aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Clostridiales RepID=H1C9C4_9FIRM
L-seryl-tRNA selenium transferase
L2_023_000G1_scaffold_2003_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

712..2259
DNA (1548bp) protein (516aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ56_9FIRM
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EHM52051.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
selenocysteine-specific translation elongation factor
L2_023_000G1_scaffold_2003_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2570..2815
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34840.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_023_000G1_scaffold_2003_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2875..3144
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34839.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_023_000G1_scaffold_2003_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3215..4987)
DNA (1773bp) protein (591aa)
Cadmium-exporting ATPase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPN1_9FIRM
Cadmium-exporting ATPase {ECO:0000313|EMBL:EHM52531.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
L2_023_000G1_scaffold_2003_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5073..5336)
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YPN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34836.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_023_000G1_scaffold_2003_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5452..5847)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DB94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57162.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Zn-finger containing protein
L2_023_000G1_scaffold_2003_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6036..6518
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34834.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative hydrolase
L2_023_000G1_scaffold_2003_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6728..8275
DNA (1548bp) protein (516aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
Ribonuclease Y n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9B5_9FIRM
L2_023_000G1_scaffold_2003_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8336..8899
DNA (564bp) protein (188aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPM6_9FIRM
L2_023_000G1_scaffold_2003_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8981..12151)
DNA (3171bp) protein (1057aa)
Sel1 repeat protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUN3_9FIRM
Sel1 repeat protein {ECO:0000313|EMBL:EHM41849.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Sel1 repeat protein
L2_023_000G1_scaffold_2003_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12347..13804)
DNA (1458bp) protein (486aa)
Sigma-70 region 2 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUN4_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EHM41850.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_023_000G1_scaffold_2003_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14098..15186)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YUN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57156.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Predicted membrane protein, putative toxin regulator
L2_023_000G1_scaffold_2003_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15296..16288)
DNA (993bp) protein (331aa)
birA; transcriptional regulator/biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9A1_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_023_000G1_scaffold_2003_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16424..16963
DNA (540bp) protein (180aa)
BioY family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57154.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_023_000G1_scaffold_2003_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17034..17324
DNA (291bp) protein (97aa)
Sporulation protein YabP n=3 Tax=Clostridiales RepID=G9YUN8_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:EHO34875.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_023_000G1_scaffold_2003_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17819..18094
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C998_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34874.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
septum formation initiator family protein
L2_023_000G1_scaffold_2003_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18101..18562
DNA (462bp) protein (154aa)
S1 RNA binding domain protein n=4 Tax=Clostridiales RepID=G9YUP0_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EHM41856.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_023_000G1_scaffold_2003_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18635..18877)
DNA (243bp) protein (81aa)
S4 domain protein n=3 Tax=Clostridiales RepID=G9YUP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57184.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
Displaying 19 items

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