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L2_023_000G1_scaffold_2012

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2012_1
unknown

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1..168
DNA (168bp) protein (56aa)

This feature has no annotations

L2_023_000G1_scaffold_2012_2
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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331..528
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CIA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ88275.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L2_023_000G1_scaffold_2012_3
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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866..1726
DNA (861bp) protein (287aa)
UPI0002D43177 related cluster n=1 Tax=unknown RepID=UPI0002D43177
Uncharacterized protein {ECO:0000313|EMBL:EFF69237.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
alpha/beta hydrolase
L2_023_000G1_scaffold_2012_4
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1778..2437
DNA (660bp) protein (220aa)
DNA-binding protein n=1 Tax=Enterococcus faecalis RepID=E3WD92_ENTFL
DNA-binding protein {ECO:0000313|EMBL:BAJ34878.1}; TaxID=1351 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis (Streptococcus faecalis).;"
XRE family transcriptional regulator
L2_023_000G1_scaffold_2012_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2592..3506
DNA (915bp) protein (305aa)
bacitracin ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002897BF5
hypothetical protein
Lantibiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ48700.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L2_023_000G1_scaffold_2012_6
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3547..4248
DNA (702bp) protein (234aa)
bacitracin ABC transporter permease n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A0750
BcrB {ECO:0000313|EMBL:AJF17088.1}; TaxID=1352 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium (Streptococcus faecium).;"
bacitracin ABC transporter permease
L2_023_000G1_scaffold_2012_7
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4248..5081
DNA (834bp) protein (278aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=565651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ARO1/DG.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=3 Tax=Enterococcus faecalis RepID=UPPP2_ENTFL
L2_023_000G1_scaffold_2012_8
unknown

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5195..5359
DNA (165bp) protein (55aa)

This feature has no annotations

L2_023_000G1_scaffold_2012_9
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5400..5630
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUC3_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL52878.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L2_023_000G1_scaffold_2012_10
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5721..6650
DNA (930bp) protein (310aa)
Bacterial transcription activator, effector binding domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PRU9_9CLOT
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AKA69227.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L2_023_000G1_scaffold_2012_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6681..8969
DNA (2289bp) protein (763aa)
Excinuclease ABC, A subunit n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KWH8_CLOBM
excinuclease ABC subunit A
Excinuclease ABC, A subunit {ECO:0000313|EMBL:ACA54433.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch Maree / Type A3).;"
L2_023_000G1_scaffold_2012_12
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8966..10003
DNA (1038bp) protein (346aa)
Beta-lactamase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PRU8_9CLOT
Beta-lactamase {ECO:0000313|EMBL:EET88000.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
beta-lactamase
L2_023_000G1_scaffold_2012_13
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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10549..13254
DNA (2706bp) protein (902aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NB53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC08415.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L2_023_000G1_scaffold_2012_14
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13256..13600
DNA (345bp) protein (115aa)
Putative hydrogenase nickel insertion protein HypA n=2 Tax=Lachnospiraceae RepID=C9L840_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG82594.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
L2_023_000G1_scaffold_2012_15
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13629..14669
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36080.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_023_000G1_scaffold_2012_16
unknown

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comp(14725..15399)
DNA (675bp) protein (225aa)

This feature has no annotations

L2_023_000G1_scaffold_2012_17
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15567..16574
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IPP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53496.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
L2_023_000G1_scaffold_2012_18
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16716..17156
DNA (441bp) protein (147aa)
MarR family transcriptional regulator n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I2F7_9CLOT
MarR family transcriptional regulator {ECO:0000313|EMBL:ETA79466.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
MarR family regulatory protein
L2_023_000G1_scaffold_2012_19
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17185..17619
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium tetani 12124569 RepID=U6EVJ6_CLOTA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI48713.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L2_023_000G1_scaffold_2012_20
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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17926..18525
DNA (600bp) protein (200aa)
Acetyltransferase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQ51_METAC
Acetyltransferase {ECO:0000313|EMBL:KKH37328.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
acetyltransferase
L2_023_000G1_scaffold_2012_21
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18678..18974
DNA (297bp) protein (99aa)
Putative ATPase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W689_DESOD
AAA ATPase
ATPase AAA {ECO:0000313|EMBL:KEZ88050.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
Displaying 21 items

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