ggKbase home page

L2_023_000G1_scaffold_2016

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2016_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

257..1513
DNA (1257bp) protein (419aa)
N-acyl-D-glucosamine 2-epimerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI51_9FIRM
N-acyl-D-glucosamine 2-epimerase {ECO:0000313|EMBL:CDD76998.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
N-acyl-D-glucosamine 2-epimerase
L2_023_000G1_scaffold_2016_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1631..1993)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75779.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid carrier protein
L2_023_000G1_scaffold_2016_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2057..2701)
DNA (645bp) protein (215aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75778.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_000G1_scaffold_2016_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3357..4052
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75777.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_023_000G1_scaffold_2016_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4137..6809
DNA (2673bp) protein (891aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75776.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Signal transduction histidine kinase
L2_023_000G1_scaffold_2016_6
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6913..8841)
DNA (1929bp) protein (643aa)
Putative ribokinase n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C041_9CLOT
Putative ribokinase {ECO:0000313|EMBL:EEG74769.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ribokinase
L2_023_000G1_scaffold_2016_7
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9241..10404
DNA (1164bp) protein (388aa)
Creatinase n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C039_9CLOT
Creatinase {ECO:0000313|EMBL:EEG74767.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
peptidase M24
L2_023_000G1_scaffold_2016_8
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10455..11624
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C038_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG74766.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ABC-type sugar transport system, periplasmic component
L2_023_000G1_scaffold_2016_9
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11737..13233
DNA (1497bp) protein (499aa)
ABC-type sugar transport system, ATPase component (EC:3.6.3.17)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75929.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L2_023_000G1_scaffold_2016_10
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13246..14214
DNA (969bp) protein (323aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C035_9CLOT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEG74763.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
inner-membrane translocator
L2_023_000G1_scaffold_2016_11
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14214..15161
DNA (948bp) protein (316aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C034_9CLOT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEG74762.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
inner-membrane translocator
L2_023_000G1_scaffold_2016_12
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15200..16171
DNA (972bp) protein (324aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EEG74760.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EEG74760.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C032_9CLOT
D-isomer specific 2-hydroxyacid dehydrogenase
L2_023_000G1_scaffold_2016_13
Pseudomonas sp. ES3-33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16185..16400
DNA (216bp) protein (72aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia sp. H160 RepID=B5WD40_9BURK
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase {ECO:0000313|EMBL:KJH77867.1}; TaxID=1628833 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. ES3-33.;"
short-chain dehydrogenase/reductase SDR
L2_023_000G1_scaffold_2016_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16397..16912
DNA (516bp) protein (172aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Clostridium RepID=A7VYV4_9CLOT
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDC03431.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
short-chain dehydrogenase/reductase SDR
L2_023_000G1_scaffold_2016_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16954..17859
DNA (906bp) protein (302aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase (EC:4.2.1.52)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=2 Tax=Clostridium RepID=E7GM14_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06362.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L2_023_000G1_scaffold_2016_16
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17985..18746
DNA (762bp) protein (254aa)
Transcriptional regulator IclR family C-terminal domain protein n=1 Tax=Blautia sp. CAG:237 RepID=R6LTL0_9FIRM
Transcriptional regulator IclR family C-terminal domain protein {ECO:0000313|EMBL:CDB77377.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Transcriptional regulator
Displaying 16 items

View Taxonomy