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L2_023_000G1_scaffold_2024

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2024_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..389
DNA (387bp) protein (129aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75678.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_000G1_scaffold_2024_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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944..2383
DNA (1440bp) protein (480aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
prolyl-tRNA synthetase, family I (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFN3_9FIRM
L2_023_000G1_scaffold_2024_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2475..3800
DNA (1326bp) protein (442aa)
uncharacterized domain HDIG (EC:2.7.7.72 3.1.3.- 3.1.4.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76132.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_023_000G1_scaffold_2024_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3918..4913
DNA (996bp) protein (332aa)
CotS family spore coat protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH54_9FIRM
CotS family spore coat protein {ECO:0000313|EMBL:EES75681.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
CotS family spore coat protein
L2_023_000G1_scaffold_2024_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5045..5323
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75682.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Bacterial nucleoid DNA-binding protein
L2_023_000G1_scaffold_2024_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5421..5660
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JH56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75683.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L2_023_000G1_scaffold_2024_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5817..6098
DNA (282bp) protein (94aa)
Sporulation protein YabP n=2 Tax=Ruminococcus RepID=C6JH57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76128.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
sporulation protein YabP
L2_023_000G1_scaffold_2024_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6102..6560
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76127.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Spore cortex biosynthesis protein, YabQ-like protein
L2_023_000G1_scaffold_2024_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6521..6835
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CDF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76126.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Septum formation initiator.
L2_023_000G1_scaffold_2024_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7022..8515
DNA (1494bp) protein (498aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Stage II sporulation protein E n=2 Tax=Ruminococcus RepID=C6JH60_9FIRM
Stage II sporulation protein E {ECO:0000313|EMBL:EES75687.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_000G1_scaffold_2024_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8556..10013
DNA (1458bp) protein (486aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH61_9FIRM
L2_023_000G1_scaffold_2024_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10006..10536
DNA (531bp) protein (177aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Ruminococcus RepID=R7CJQ2_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EQM98719.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_000G1_scaffold_2024_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10553..12406
DNA (1854bp) protein (618aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH62_9FIRM
L2_023_000G1_scaffold_2024_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12758..14893
DNA (2136bp) protein (712aa)
Glycosidases (EC:3.2.1.20)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75690.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_000G1_scaffold_2024_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15363..16226
DNA (864bp) protein (288aa)
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH64_9FIRM
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EES75691.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_023_000G1_scaffold_2024_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16548..17990
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75692.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Putative peptidoglycan binding domain./L,D-transpeptidase catalytic domain.
L2_023_000G1_scaffold_2024_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18053..18589
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JH66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75693.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Nitroreductase
Displaying 17 items

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