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L2_023_000G1_scaffold_2025

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2025_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..584
DNA (582bp) protein (194aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGR4_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDS09162.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ABC-type transporter, integral membrane subunit
L2_023_000G1_scaffold_2025_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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597..1571
DNA (975bp) protein (325aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGR5_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDS09163.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ABC-type transporter, integral membrane subunit
L2_023_000G1_scaffold_2025_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1571..2350
DNA (780bp) protein (260aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGR6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS09164.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_2025_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2354..3070
DNA (717bp) protein (239aa)
ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGR7_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS09165.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
livF; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily
L2_023_000G1_scaffold_2025_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3112..3894
DNA (783bp) protein (261aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
FAH family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGR8_9FIRM
FAH family protein {ECO:0000313|EMBL:EDS09166.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_2025_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3891..4679
DNA (789bp) protein (263aa)
Electron transfer flavoprotein domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGR9_9FIRM
Electron transfer flavoprotein domain protein {ECO:0000313|EMBL:EDS09167.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Electron transfer flavoprotein, beta subunit
L2_023_000G1_scaffold_2025_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4695..5906
DNA (1212bp) protein (404aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGS0_9FIRM
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:EDS09168.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Electron transfer flavoprotein, alpha subunit
L2_023_000G1_scaffold_2025_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5891..7291
DNA (1401bp) protein (467aa)
Putative glycolate oxidase, subunit GlcD n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGS1_9FIRM
Putative glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:EDS09169.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
FAD linked oxidase domain-containing protein
L2_023_000G1_scaffold_2025_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7346..8575)
DNA (1230bp) protein (410aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGS2_9FIRM
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EDS09170.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
putative HAD hydrolase, IIB family
L2_023_000G1_scaffold_2025_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8675..9424)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09171.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_2025_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9441..10784)
DNA (1344bp) protein (448aa)
RNA polymerase sigma-54 factor n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGS4_9FIRM
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EDS09172.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
RNA polymerase sigma-54 factor
L2_023_000G1_scaffold_2025_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10926..12839)
DNA (1914bp) protein (638aa)
NAD+ synthase {ECO:0000313|EMBL:EDS09173.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EDS09173.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGS5_9FIRM
L2_023_000G1_scaffold_2025_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13670..14959
DNA (1290bp) protein (430aa)
Permease, cytosine/purine, uracil, thiamine, allantoin family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGS9_9FIRM
Permease, cytosine/purine, uracil, thiamine, allantoin family {ECO:0000313|EMBL:EDS09177.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Permease for cytosine/purines uracil thiamine allantoin
L2_023_000G1_scaffold_2025_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15133..16248)
DNA (1116bp) protein (372aa)
ROK family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGT1_9FIRM
ROK family protein {ECO:0000313|EMBL:EDS09179.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
transcriptional regulator/sugar kinase
L2_023_000G1_scaffold_2025_15
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16604..18103
DNA (1500bp) protein (500aa)
ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGT4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS09181.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
sugar ABC transporter ATPase
L2_023_000G1_scaffold_2025_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18117..18887
DNA (771bp) protein (257aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGT5_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDS09183.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ribose/xylose/arabinose/galactoside ABC transporter permease
Displaying 16 items

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