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L2_023_000G1_scaffold_2026

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2026_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106..564)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82962.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_023_000G1_scaffold_2026_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(580..846)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82961.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Coenzyme PQQ synthesis protein D (PqqD)
L2_023_000G1_scaffold_2026_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(836..1552)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82960.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_023_000G1_scaffold_2026_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1614..4316)
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82959.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_023_000G1_scaffold_2026_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4309..4614)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82958.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_023_000G1_scaffold_2026_6
unknown

Not on your lists

comp(4641..4781)
DNA (141bp) protein (47aa)

This feature has no annotations

L2_023_000G1_scaffold_2026_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5005..6312
DNA (1308bp) protein (436aa)
Alpha amylase, catalytic domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW7_9CLOT
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEA82957.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Glycosidases
L2_023_000G1_scaffold_2026_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6402..6920)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82956.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_023_000G1_scaffold_2026_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6946..7962)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82955.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_023_000G1_scaffold_2026_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7980..8945)
DNA (966bp) protein (322aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=2 Tax=Clostridium RepID=B6FLW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22524.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_023_000G1_scaffold_2026_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8935..10797)
DNA (1863bp) protein (621aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW3_9CLOT
L2_023_000G1_scaffold_2026_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10787..12400)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PVN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22526.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
two component transcriptional regulator, AraC family
L2_023_000G1_scaffold_2026_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12525..14180)
DNA (1656bp) protein (552aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW0_9CLOT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEA82987.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L2_023_000G1_scaffold_2026_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14199..15707)
DNA (1509bp) protein (503aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FLV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22528.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_023_000G1_scaffold_2026_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15824..17107)
DNA (1284bp) protein (428aa)
Galactose/glucose-binding lipoprotein n=2 Tax=Clostridium RepID=B6FLV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22529.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
galactose/glucose-binding lipoprotein
L2_023_000G1_scaffold_2026_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17379..17885)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FLV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82984.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_023_000G1_scaffold_2026_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17948..18823)
DNA (876bp) protein (292aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=2 Tax=Clostridium RepID=B6FLV6_9CLOT
Displaying 17 items

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