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L2_023_000G1_scaffold_2031

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2031_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(367..960)
DNA (594bp) protein (198aa)
Regulatory protein RecX n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUS9_BIFLJ
regulatory protein RecX
Regulatory protein RecX {ECO:0000313|EMBL:ADH00635.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_023_000G1_scaffold_2031_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(963..2156)
DNA (1194bp) protein (398aa)
Protein RecA n=4 Tax=Bifidobacterium longum subsp. longum RepID=D6DCY9_BIFLN
RecA protein
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L2_023_000G1_scaffold_2031_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2457..2690)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MUC3_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71367.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_023_000G1_scaffold_2031_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2802..3317)
DNA (516bp) protein (172aa)
Possible DNA binding protein n=15 Tax=Bifidobacterium RepID=Q8G4H0_BIFLO
Helix-turn-helix.
XRE family transcriptional regulator {ECO:0000313|EMBL:KEY31409.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_023_000G1_scaffold_2031_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3377..3910)
DNA (534bp) protein (178aa)
CinA n=7 Tax=Bifidobacterium RepID=E4R2E0_BIFLM
cinA; cina
Competence/damage-inducible domain protein CinA {ECO:0000313|EMBL:EEI79802.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_023_000G1_scaffold_2031_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3922..4557)
DNA (636bp) protein (212aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EEI79801.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EEI79801.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=4 Tax=Bifidobacterium longum subsp. longum RepID=F8APP5_BIFLN
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
L2_023_000G1_scaffold_2031_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4735..7644)
DNA (2910bp) protein (970aa)
FtsK/SpoIIIE family protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GYH5_BIFLN
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EEI79800.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
cell division protein FtsK
L2_023_000G1_scaffold_2031_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7877..8605
DNA (729bp) protein (243aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=Q8CY48_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44795.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_023_000G1_scaffold_2031_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8639..9625)
DNA (987bp) protein (329aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
tRNA dimethylallyltransferase n=13 Tax=Bifidobacterium RepID=MIAA_BIFLD
tRNA delta(2)-isopentenylpyrophosphate transferase
L2_023_000G1_scaffold_2031_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9636..11090)
DNA (1455bp) protein (485aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=10 Tax=Bifidobacterium RepID=MIAB_BIFLD
miaB; miab
L2_023_000G1_scaffold_2031_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11120..11962
DNA (843bp) protein (281aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=Q8G4H5_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25206.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_023_000G1_scaffold_2031_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11995..13035)
DNA (1041bp) protein (347aa)
EamA-like transporter family protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BHD6_BIFLN
EamA-like transporter family protein {ECO:0000313|EMBL:EIJ30779.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L2_023_000G1_scaffold_2031_13
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13151..14050)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NDY0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY95382.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L2_023_000G1_scaffold_2031_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14391..15041
DNA (651bp) protein (217aa)
GCN5-related N-acetyltransferase n=2 Tax=Bifidobacterium longum RepID=B7GQF6_BIFLS
putative acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACJ52036.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_023_000G1_scaffold_2031_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15131..17236
DNA (2106bp) protein (702aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XZ31_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:ESV33756.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L2_023_000G1_scaffold_2031_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17256..17801)
DNA (546bp) protein (182aa)
PilT protein domain protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUU6_BIFLJ
twitching motility protein PilT
Twitching motility protein PilT {ECO:0000313|EMBL:AIW44797.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_023_000G1_scaffold_2031_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17801..18163)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4I4_BIFLO
hypothetical protein
Damage-inducible protein J {ECO:0000313|EMBL:KEY26562.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_023_000G1_scaffold_2031_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18309..18788)
DNA (480bp) protein (160aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275, ECO:0000313|EMBL:CBK70345.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Aconitase A n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DQW4_BIFLD
Aconitate hydratase
Displaying 18 items

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