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L2_023_000G1_scaffold_2033

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2033_1
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..193
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00035D72EB
Uncharacterized protein {ECO:0000313|EMBL:ERI95907.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_023_000G1_scaffold_2033_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

286..855
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J981_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78883.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_000G1_scaffold_2033_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

794..1327
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J980_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78882.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_000G1_scaffold_2033_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1343..2215)
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSE9_9FIRM
L2_023_000G1_scaffold_2033_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2511..3368
DNA (858bp) protein (286aa)
Sigma-E processing peptidase SpoIIGA n=2 Tax=Ruminococcus RepID=C6J978_9FIRM
Sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:EES78880.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Sporulation factor SpoIIGA.
L2_023_000G1_scaffold_2033_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3386..4096
DNA (711bp) protein (237aa)
RNA polymerase sigma factor n=2 Tax=Ruminococcus RepID=C6J977_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RNA polymerase, sigma 29 subunit, SigE
L2_023_000G1_scaffold_2033_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4269..5240
DNA (972bp) protein (324aa)
Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins (EC:1.97.1.4)
Radical SAM domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNZ4_9FIRM
Radical SAM domain-containing protein {ECO:0000313|EMBL:CDD79969.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_023_000G1_scaffold_2033_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5415..6854)
DNA (1440bp) protein (480aa)
TrkH family potassium uptake protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J975_9FIRM
TrkH family potassium uptake protein {ECO:0000313|EMBL:EES78877.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Trk-type K+ transport systems, membrane components
L2_023_000G1_scaffold_2033_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6867..8225)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J974_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78876.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
K+ transport systems, NAD-binding component
L2_023_000G1_scaffold_2033_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8504..9076)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79974.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Mn-containing catalase
L2_023_000G1_scaffold_2033_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9177..10592)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J942_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78844.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
resolvase domain-containing protein
L2_023_000G1_scaffold_2033_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10762..11304)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78410.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized protein conserved in cyanobacteria
L2_023_000G1_scaffold_2033_13
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11471..11815)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BQ79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO80980.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
hypothetical protein
L2_023_000G1_scaffold_2033_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11836..12423)
DNA (588bp) protein (196aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SWE9_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC65493.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_023_000G1_scaffold_2033_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12596..13060)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J939_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78841.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative phage protein
L2_023_000G1_scaffold_2033_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13102..13329)
DNA (228bp) protein (76aa)
YgiT-type zinc finger domain-containing protein n=2 Tax=Ruminococcus RepID=C6J938_9FIRM
YgiT-type zinc finger domain-containing protein {ECO:0000313|EMBL:EES78840.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_000G1_scaffold_2033_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13329..13649)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J937_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78839.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_000G1_scaffold_2033_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13651..14148)
DNA (498bp) protein (166aa)
Repressor protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIY2_9FIRM
Repressor protein {ECO:0000313|EMBL:CDD77702.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phage repressor
L2_023_000G1_scaffold_2033_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14309..14542
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J935_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78837.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cro repressor
L2_023_000G1_scaffold_2033_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14652..14807
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CHL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77704.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_023_000G1_scaffold_2033_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14881..15174
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CIC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77705.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_000G1_scaffold_2033_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15219..16652
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77706.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycosyl hydrolase family 25
L2_023_000G1_scaffold_2033_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16855..17130)
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J930_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78832.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_023_000G1_scaffold_2033_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17127..17450)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77711.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_023_000G1_scaffold_2033_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17811..18611
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J928_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78830.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Metal-dependent hydrolases of the beta-lactamase superfamily III
Displaying 25 items

View Taxonomy