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L2_023_000G1_scaffold_2037

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2037_1
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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2..1255
DNA (1254bp) protein (418aa)
Site-specific recombinase phage integrase family n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UA66_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDC76971.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
Site-specific recombinase XerD
L2_023_000G1_scaffold_2037_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1808..2485)
DNA (678bp) protein (226aa)
Hemolysin III family channel protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF4_9FIRM
Hemolysin III {ECO:0000313|EMBL:KJF39978.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hemolysin III family channel protein
L2_023_000G1_scaffold_2037_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2668..3987)
DNA (1320bp) protein (440aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate-tRNA ligase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF3_9FIRM
Aspartate-tRNA ligase {ECO:0000313|EMBL:EHL72503.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_023_000G1_scaffold_2037_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4311..5216
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72502.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
putative acyltransferase
L2_023_000G1_scaffold_2037_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5253..6926
DNA (1674bp) protein (558aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF1_9FIRM
L2_023_000G1_scaffold_2037_6
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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7132..7308
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39981.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_023_000G1_scaffold_2037_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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7309..7623
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0G8W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39981.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_023_000G1_scaffold_2037_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8009..10240
DNA (2232bp) protein (744aa)
formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRE9_9FIRM
Formate acetyltransferase {ECO:0000313|EMBL:EHL72499.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_023_000G1_scaffold_2037_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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10256..10999
DNA (744bp) protein (248aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRE8_9FIRM
L2_023_000G1_scaffold_2037_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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11323..11895
DNA (573bp) protein (191aa)
Putative manganese efflux pump MntP n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRE7_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_023_000G1_scaffold_2037_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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12035..13408
DNA (1374bp) protein (458aa)
Transporter n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRE6_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Na+-dependent transporters of the SNF family
L2_023_000G1_scaffold_2037_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13474..14823)
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72495.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
peptidase S1 and S6 chymotrypsin/Hap
L2_023_000G1_scaffold_2037_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14912..16441)
DNA (1530bp) protein (510aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRE4_9FIRM
Signal transduction histidine kinase
L2_023_000G1_scaffold_2037_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16438..17127)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72493.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_023_000G1_scaffold_2037_15
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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17673..18557
DNA (885bp) protein (295aa)
DNA-damage-inducible protein D n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0ME57_9FIRM
DNA-damage-inducible protein D {ECO:0000313|EMBL:EDR98227.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
Displaying 15 items

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