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L2_023_000G1_scaffold_2084

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2084_1
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..85)
DNA (84bp) protein (28aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=I3WIA8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22609.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_2084_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(69..1031)
DNA (963bp) protein (321aa)
GCN5-related N-acetyl transferase n=2 Tax=Bifidobacterium bifidum RepID=I3WIA9_BIFBI
GCN5-related N-acetyl transferase
ASCH domain protein {ECO:0000313|EMBL:ERI82920.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98295.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_2084_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1136..1708
DNA (573bp) protein (191aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bifidobacterium bifidum RepID=E4VA38_BIFBI
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFR50480.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
integral membrane sensor signal transduction histidine kinase
L2_023_000G1_scaffold_2084_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1813..2508
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WIB1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04624.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_2084_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2910..3608
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IMM8_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE49985.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_023_000G1_scaffold_2084_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3524..3922)
DNA (399bp) protein (133aa)
Glyoxalase family protein n=2 Tax=Bifidobacterium bifidum RepID=U2DT33_BIFBI
putative lactoylglutathione lyase
Glyoxalase family protein {ECO:0000313|EMBL:KFI43138.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_000G1_scaffold_2084_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4405..5367
DNA (963bp) protein (321aa)
Conserved hypothetical membrane protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WIB3_BIFBI
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:AFL04626.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_2084_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5648..5860)
DNA (213bp) protein (71aa)
Macrolide-efflux protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NX98_BIFBP
putative MFS-type transporter
Putative MFS-type transporter {ECO:0000313|EMBL:AFL04628.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_2084_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5809..6531)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DT39_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82931.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
MFS transporter macrolide efflux protein
L2_023_000G1_scaffold_2084_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6549..6908
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M371_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF15525.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L2_023_000G1_scaffold_2084_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7011..7904
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I5F9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE49989.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_023_000G1_scaffold_2084_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8207..8758
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H7K1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE49991.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_023_000G1_scaffold_2084_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8734..9336)
DNA (603bp) protein (201aa)
nqo; ribosyldihydronicotinamide dehydrogenase (EC:1.10.99.2)
Ribosyldihydronicotinamide dehydrogenase {ECO:0000313|EMBL:AFL04633.1}; EC=1.10.99.2 {ECO:0000313|EMBL:AFL04633.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
NAD(P)H oxidoreductase n=6 Tax=Bifidobacterium RepID=E4NXA3_BIFBP
L2_023_000G1_scaffold_2084_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9383..10402)
DNA (1020bp) protein (340aa)
VanZ family protein n=2 Tax=Bifidobacterium bifidum RepID=E4NXA4_BIFBP
VanZ family protein
VanZ family protein {ECO:0000313|EMBL:EKF14781.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_023_000G1_scaffold_2084_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10693..11514
DNA (822bp) protein (274aa)
Transcriptional regulator, winged helix family protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQY8_BIFBS
transcriptional regulator
Transcriptional regulator, winged helix family protein {ECO:0000313|EMBL:ADO53260.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_2084_16
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11695..12099)
DNA (405bp) protein (135aa)
Pyridoxamine 5'-phosphate oxidase pdxH n=4 Tax=Bifidobacterium RepID=E3EQY9_BIFBS
pyridoxamine 5'-phosphate oxidase
Pyridoxamine 5'-phosphate oxidase pdxH {ECO:0000313|EMBL:CDB22595.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_2084_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12227..13138)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CI54_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83718.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_023_000G1_scaffold_2084_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13372..14067
DNA (696bp) protein (232aa)
Uncharacterized protein n=5 Tax=Bifidobacterium bifidum RepID=E4VA52_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83719.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_2084_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14204..15430
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HTW0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE49962.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_023_000G1_scaffold_2084_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16025..17287)
DNA (1263bp) protein (421aa)
putative cyclomaltodextrinase or neopullalanase (EC:3.2.1.135)
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium bifidum RepID=U2DQ67_BIFBI
Putative alpha-amylase {ECO:0000313|EMBL:BAQ98315.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_2084_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17348..17791)
DNA (444bp) protein (148aa)
Transmembrane protein n=8 Tax=Bifidobacterium RepID=E3EQZ4_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83723.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_2084_22
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17928..19013)
DNA (1086bp) protein (362aa)
Phosphoglycerate mutase n=2 Tax=Bifidobacterium RepID=R6GAX7_9BIFI
Phosphoglycerate mutase {ECO:0000313|EMBL:CDB22573.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
gpm4; phosphoglycerate mutase
L2_023_000G1_scaffold_2084_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19018..20352)
DNA (1335bp) protein (445aa)
Bifunctional protein GlmU n=2 Tax=Bifidobacterium bifidum RepID=U2DVD2_BIFBI
glmU; UDP-N-acetylglucosamine pyrophosphorylase
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_2084_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20610..21587)
DNA (978bp) protein (326aa)
ribose-phosphate pyrophosphokinase PrsA (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Ribose-phosphate pyrophosphokinase n=3 Tax=Bifidobacterium bifidum RepID=E4NXB5_BIFBP
L2_023_000G1_scaffold_2084_25
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21722..22480)
DNA (759bp) protein (253aa)
nadD; nicotinate-nucleotide adenylyltransferase NadD (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Probable nicotinate-nucleotide adenylyltransferase n=3 Tax=Bifidobacterium RepID=E4NXB6_BIFBP
L2_023_000G1_scaffold_2084_26
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22477..23028)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GAX5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22568.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_023_000G1_scaffold_2084_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23025..24323)
DNA (1299bp) protein (433aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Gamma-glutamyl phosphate reductase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WID5_BIFBI
L2_023_000G1_scaffold_2084_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24519..26006
DNA (1488bp) protein (496aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000313|EMBL:EKF15538.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EKF15538.1};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
ThrC Threonine synthase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXB9_BIFBP
L2_023_000G1_scaffold_2084_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26040..26750)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2H7H3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE49951.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L2_023_000G1_scaffold_2084_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26752..27492)
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VA65_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83733.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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