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L2_023_000G1_scaffold_2187

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2187_1
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..1069
DNA (1068bp) protein (356aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
2-isopropylmalate synthase n=2 Tax=Bifidobacterium longum RepID=E8MGB6_BIFL2
2-isopropylmalate synthase
L2_023_000G1_scaffold_2187_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1141..3546)
DNA (2406bp) protein (802aa)
Transglycosylase n=7 Tax=Bifidobacterium RepID=C5E9D8_BIFLI
Transglycosylase {ECO:0000313|EMBL:EEQ54547.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
penicillin-binding protein
L2_023_000G1_scaffold_2187_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4109..5074
DNA (966bp) protein (322aa)
Peptidase n=15 Tax=Bifidobacterium RepID=F8AU47_BIFLN
peptidase
PAP2 superfamily {ECO:0000313|EMBL:CBK71220.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_023_000G1_scaffold_2187_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5198..8284
DNA (3087bp) protein (1029aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
DNA topoisomerase 1 n=8 Tax=Bifidobacterium RepID=Q8G6Z5_BIFLO
DNA topoisomerase I
L2_023_000G1_scaffold_2187_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8562..9182
DNA (621bp) protein (207aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Thymidylate kinase n=8 Tax=Bifidobacterium RepID=E8MGC0_BIFL2
thymidylate kinase
L2_023_000G1_scaffold_2187_6
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9179..10330
DNA (1152bp) protein (384aa)
DNA polymerase III, delta prime subunit (EC:2.7.7.7)
Possible DNA polymerase III delta prime subunit n=5 Tax=Bifidobacterium RepID=Q8G6Z7_BIFLO
DNA polymerase III subunit delta {ECO:0000313|EMBL:EFV36623.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_023_000G1_scaffold_2187_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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10450..11004
DNA (555bp) protein (185aa)
Phospholipid-binding protein n=6 Tax=Bifidobacterium RepID=F8AU43_BIFLN
phospholipid-binding protein
Raf-like protein {ECO:0000313|EMBL:EEQ54541.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_023_000G1_scaffold_2187_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11147..12748
DNA (1602bp) protein (534aa)
Dipeptidase n=12 Tax=Bifidobacterium RepID=PEPD_BIFLO
dipeptidase
Dipeptidase {ECO:0000313|EMBL:BAJ65826.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_023_000G1_scaffold_2187_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12880..14397
DNA (1518bp) protein (506aa)
Formyltetrahydrofolate synthetase n=9 Tax=Bifidobacterium RepID=B3DU97_BIFLD
thfS2; thfs2
Putative formate--tetrahydrofolate ligase {ECO:0000313|EMBL:EEI81604.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_023_000G1_scaffold_2187_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14794..15141)
DNA (348bp) protein (116aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=B3DU95_BIFLD
Macrophage migration inhibitory factor-related hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI98307.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_023_000G1_scaffold_2187_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15304..15879
DNA (576bp) protein (192aa)
GtrA family protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT89_BIFLS
hypothetical protein
Narrowly conserved hypothetical membrane protein {ECO:0000313|EMBL:AAN24307.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_023_000G1_scaffold_2187_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15927..17372)
DNA (1446bp) protein (482aa)
Major Facilitator Superfamily n=10 Tax=Bifidobacterium longum RepID=D6DAK8_BIFLN
Major Facilitator Superfamily.
Putative permease {ECO:0000313|EMBL:ACD98712.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_023_000G1_scaffold_2187_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17596..18147
DNA (552bp) protein (184aa)
Fructose-2,6-bisphosphatase n=9 Tax=Bifidobacterium RepID=D6DAK7_BIFLN
Fructose-2,6-bisphosphatase
Histidine phosphatase superfamily (Branch 1) {ECO:0000313|EMBL:EIJ22079.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_023_000G1_scaffold_2187_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18245..19198
DNA (954bp) protein (318aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=C2GST0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ22081.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_023_000G1_scaffold_2187_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19277..20194
DNA (918bp) protein (306aa)
Aldose 1-epimerase-like protein n=13 Tax=Bifidobacterium RepID=B3DU90_BIFLD
hypothetical protein
Aldose 1-epimerase {ECO:0000313|EMBL:EIJ30930.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_023_000G1_scaffold_2187_16
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20312..21493)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NFY9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY96012.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L2_023_000G1_scaffold_2187_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21768..21866
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWZ8_BIFL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96013.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_023_000G1_scaffold_2187_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22050..23570
DNA (1521bp) protein (507aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Glutamate--tRNA ligase n=14 Tax=Bifidobacterium RepID=SYE_BIFLD
glutamyl-tRNA synthase
L2_023_000G1_scaffold_2187_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24110..24598
DNA (489bp) protein (163aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=V6XYY2_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70303.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_023_000G1_scaffold_2187_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24995..25816
DNA (822bp) protein (274aa)
Endo-alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:AAX44931.1}; EC=3.2.1.97 {ECO:0000313|EMBL:AAX44931.1};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Endo-alpha-N-acetylgalactosaminidase n=1 Tax=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) RepID=Q3T552_BIFL2
endo-alpha-N-acetylgalactosaminidase
Displaying 20 items

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