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L2_023_000G1_scaffold_2251

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2251_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..465)
DNA (465bp) protein (155aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
CTP synthase n=3 Tax=Bifidobacterium RepID=A1A1A7_BIFAA
CTP synthase
L2_023_000G1_scaffold_2251_2
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(480..725)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV58_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21994.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L2_023_000G1_scaffold_2251_3
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(776..1225)
DNA (450bp) protein (150aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
3-dehydroquinate dehydratase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV59_9BIFI
3-dehydroquinate dehydratase
L2_023_000G1_scaffold_2251_4
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1243..2871)
DNA (1629bp) protein (543aa)
3-dehydroquinate synthase {ECO:0000313|EMBL:EEB21996.1}; EC=4.2.3.4 {ECO:0000313|EMBL:EEB21996.1};; Shikimate kinase/3-dehydroquinate synthase {ECO:0000313|EMBL:BAR01720.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
3-dehydroquinate synthase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV60_9BIFI
3-dehydroquinate synthase
L2_023_000G1_scaffold_2251_5
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2880..4073)
DNA (1194bp) protein (398aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Chorismate synthase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV61_9BIFI
chorismate synthase
L2_023_000G1_scaffold_2251_6
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4121..4591
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV62_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21998.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
peptidase A24
L2_023_000G1_scaffold_2251_7
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4592..5776)
DNA (1185bp) protein (395aa)
YceG family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV63_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR01717.1}; YceG family protein {ECO:0000313|EMBL:EEB21999.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L2_023_000G1_scaffold_2251_8
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5791..6246)
DNA (456bp) protein (152aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Putative Holliday junction resolvase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV64_9BIFI
Holliday junction resolvase
L2_023_000G1_scaffold_2251_9
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6257..8935)
DNA (2679bp) protein (893aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Alanine--tRNA ligase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV65_9BIFI
alanyl-tRNA synthetase
L2_023_000G1_scaffold_2251_10
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9023..9259)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV66_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ14406.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_023_000G1_scaffold_2251_11
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9259..9648)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV67_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB22003.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L2_023_000G1_scaffold_2251_12
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9737..10420)
DNA (684bp) protein (228aa)
Phosphoglycerate mutase family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV68_9BIFI
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EEB22004.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
fructose-2,6-bisphosphatase
L2_023_000G1_scaffold_2251_13
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10447..10830
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV69_9BIFI
Integral membrane protein {ECO:0000313|EMBL:KFI65380.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
membrane protein
L2_023_000G1_scaffold_2251_14
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10940..11566)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV70_9BIFI
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
30S ribosomal protein S4
L2_023_000G1_scaffold_2251_15
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11845..12681)
DNA (837bp) protein (279aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI65378.1}; EC=3.6.3.25 {ECO:0000313|EMBL:KFI65378.1};; Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ28951.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV72_9BIFI
ABC transporter ATP-binding protein
L2_023_000G1_scaffold_2251_16
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12681..13895)
DNA (1215bp) protein (405aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV73_9BIFI
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEB22009.1}; Putative ABC transporter permease component {ECO:0000313|EMBL:BAR01708.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
ABC transporter permease
L2_023_000G1_scaffold_2251_17
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13903..14301)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV74_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR01707.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L2_023_000G1_scaffold_2251_18
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14422..17085)
DNA (2664bp) protein (888aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV75_9BIFI
ATP-dependent DNA helicase PcrA
Displaying 18 items

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