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L2_023_000G1_scaffold_2342

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2342_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1614)
DNA (1614bp) protein (538aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Probable phosphoketolase n=7 Tax=Bifidobacterium bifidum RepID=E3EQW1_BIFBS
xylulose-5-phosphate/Fructose-6-phosphate phosphoketolase
L2_023_000G1_scaffold_2342_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2143..3705
DNA (1563bp) protein (521aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WHK1_BIFBI
L2_023_000G1_scaffold_2342_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4246..4878)
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V968_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53001.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_2342_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5037..5252
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V965_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50158.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_023_000G1_scaffold_2342_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5222..5440)
DNA (219bp) protein (73aa)
Phage transcriptional regulator n=3 Tax=Bifidobacterium bifidum RepID=I3WHJ1_BIFBI
alpA; phage transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ADO52999.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_2342_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6052..6693
DNA (642bp) protein (214aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=I3WHJ0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52998.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_2342_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7501..8172)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WHI7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52996.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_2342_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8737..10218
DNA (1482bp) protein (494aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=I3WHI6_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04349.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_2342_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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10215..12029
DNA (1815bp) protein (605aa)
phosphate acetyltransferase n=1 Tax=Bifidobacterium bifidum RepID=UPI00035EE886
pta; phosphate acetyltransferase
Phosphate acetyltransferase {ECO:0000313|EMBL:ADO52994.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_2342_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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12310..13539
DNA (1230bp) protein (410aa)
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Acetate kinase n=6 Tax=Bifidobacterium RepID=I3WHI4_BIFBI
L2_023_000G1_scaffold_2342_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13653..15164)
DNA (1512bp) protein (504aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CEM7_BIFBI
L2_023_000G1_scaffold_2342_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15205..15822
DNA (618bp) protein (206aa)
Peptidase E {ECO:0000313|EMBL:KFI42827.1}; EC=3.4.13.21 {ECO:0000313|EMBL:KFI42827.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Peptidase E n=5 Tax=Bifidobacterium RepID=E3EQU9_BIFBS
putative peptidase
L2_023_000G1_scaffold_2342_13
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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16300..16497
DNA (198bp) protein (66aa)
Integrase/recombinase (XerD/RipX family) n=2 Tax=Bifidobacterium RepID=E3EQU8_BIFBS
xerC; putative tyrosine recombinase
Integrase/recombinase (XerD/RipX family) {ECO:0000313|EMBL:CDB22266.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Displaying 13 items

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