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L2_023_000G1_scaffold_2478

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2478_1
Cronobacter universalis, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..627
DNA (627bp) protein (209aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Cronobacter universalis NCTC 9529 RepID=K8DID3_9ENTR
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:CCK16893.1}; TaxID=1074000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter universalis NCTC 9529.;"
L2_023_000G1_scaffold_2478_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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859..1143
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
DNA-directed RNA polymerase subunit omega n=17 Tax=Bifidobacterium RepID=RPOZ_BIFLD
DNA-directed RNA polymerase omega subunit
L2_023_000G1_scaffold_2478_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1421..2641
DNA (1221bp) protein (407aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
S-adenosylmethionine synthase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B104_BIFLN
S-adenosylmethionine synthase
L2_023_000G1_scaffold_2478_4
unknown

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comp(3032..3307)
DNA (276bp) protein (92aa)

This feature has no annotations

L2_023_000G1_scaffold_2478_5
unknown

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comp(3458..4096)
DNA (639bp) protein (213aa)

This feature has no annotations

L2_023_000G1_scaffold_2478_6
unknown

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comp(4720..5271)
DNA (552bp) protein (184aa)

This feature has no annotations

L2_023_000G1_scaffold_2478_7
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6302..6598)
DNA (297bp) protein (99aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
CRISPR-associated endoribonuclease Cas2 n=9 Tax=Bifidobacterium animalis subsp. lactis RepID=C6A959_BIFLB
CRISPR-associated protein Cas2
L2_023_000G1_scaffold_2478_8
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6648..8240)
DNA (1593bp) protein (531aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
CRISPR-associated endonuclease Cas1 n=2 Tax=Bifidobacterium dentium RepID=E0Q565_9BIFI
hypothetical protein
L2_023_000G1_scaffold_2478_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8230..9363)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q564_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEY21625.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
csb3; putative CRISPR-associated Csb3 family protein
L2_023_000G1_scaffold_2478_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9367..12576)
DNA (3210bp) protein (1070aa)
ATP-dependent helicase n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R6F9_BIFAB
Uncharacterized protein {ECO:0000313|EMBL:KEY21624.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
CRISPR-associated helicase Cas3 family protein
L2_023_000G1_scaffold_2478_11
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12573..14315)
DNA (1743bp) protein (581aa)
CRISPR-associated protein, GSU0054 family (Cas_GSU0054) n=2 Tax=Bifidobacterium dentium RepID=E0Q562_9BIFI
CRISPR-associated protein {ECO:0000313|EMBL:KFJ08297.1}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
cas5_cas6; CRISPR-associated Cas5 / CRISPR-associated protein Cas6
L2_023_000G1_scaffold_2478_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(14331..15665)
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R6G1_BIFAB
Uncharacterized protein {ECO:0000313|EMBL:KEY21622.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
Displaying 12 items

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