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L2_023_000G1_scaffold_2557

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2557_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..134)
DNA (132bp) protein (44aa)
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CBK70669.1}; EC=2.5.1.49 {ECO:0000313|EMBL:CBK70669.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
O-acetylhomoserine (Thiol)-lyase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AQZ8_BIFLN
O-acetylhomoserine (thiol)-lyase
L2_023_000G1_scaffold_2557_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

608..1480
DNA (873bp) protein (291aa)
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Pyridoxal/pyridoxine/pyridoxamine kinase n=11 Tax=Bifidobacterium RepID=D6D917_BIFLN
L2_023_000G1_scaffold_2557_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1717..2220
DNA (504bp) protein (168aa)
UPF0102 protein BLJ_0797 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTQ7_BIFLJ
endonuclease
UPF0102 protein BL171B_02045 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_023_000G1_scaffold_2557_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2277..3812
DNA (1536bp) protein (512aa)
Mg chelatase-related protein n=15 Tax=Bifidobacterium RepID=D6D919_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97745.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_023_000G1_scaffold_2557_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3809..5509
DNA (1701bp) protein (567aa)
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake n=4 Tax=Bifidobacterium longum RepID=S3DQ15_BIFLN
hypothetical protein
DNA protecting protein DprA {ECO:0000313|EMBL:KEY22055.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_023_000G1_scaffold_2557_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5566..7431
DNA (1866bp) protein (622aa)
SdhA n=16 Tax=Bifidobacterium RepID=E4QZ84_BIFLM
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EIJ25860.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
succinate dehydrogenase flavoprotein subunit
L2_023_000G1_scaffold_2557_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7527..8492
DNA (966bp) protein (322aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur family protein {ECO:0000313|EMBL:CCK34794.1}; EC=1.3.99.1 {ECO:0000313|EMBL:CCK34794.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Succinate dehydrogenase and fumarate reductase iron-sulfur family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0C0_BIFLN
succinate dehydrogenase iron-sulfur subunit
L2_023_000G1_scaffold_2557_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8571..9251
DNA (681bp) protein (227aa)
Methyltransferase n=16 Tax=Bifidobacterium RepID=F8AR05_BIFLN
methyltransferase
O-methyltransferase {ECO:0000313|EMBL:EEI81481.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_023_000G1_scaffold_2557_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9297..10238)
DNA (942bp) protein (314aa)
Possible lysine decarboxylase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0K8_BIFLN
Possible lysine decarboxylase family protein {ECO:0000313|EMBL:CCK34792.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L2_023_000G1_scaffold_2557_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10471..11889)
DNA (1419bp) protein (473aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I2U4_BIFLN
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
kefB; kefb
L2_023_000G1_scaffold_2557_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12370..13788)
DNA (1419bp) protein (473aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=13 Tax=Bifidobacterium RepID=D6D926_BIFLN
ATP-dependent Clp protease ATP-binding subunit
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_023_000G1_scaffold_2557_12
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13910..14611)
DNA (702bp) protein (234aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NEQ7_9BIFI
L2_023_000G1_scaffold_2557_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14617..15189)
DNA (573bp) protein (191aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
ATP-dependent Clp protease proteolytic subunit 2 n=21 Tax=Bifidobacterium RepID=CLPP2_BIFLO
clpP2; clpp2
Displaying 13 items

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