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L2_023_000G1_scaffold_2566

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_2566_1
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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246..1250
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GF90_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB24093.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_2566_2
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1458..1979
DNA (522bp) protein (174aa)
50S ribosomal protein L10 n=7 Tax=Bifidobacterium RepID=E4NZ94_BIFBP
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_2566_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2079..2462
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 n=6 Tax=Bifidobacterium RepID=E3EMK1_BIFBS
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_2566_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2462..2590
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GI67_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53739.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_2566_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2755..4410
DNA (1656bp) protein (552aa)
FHA domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CD99_BIFBI
FHA domain protein {ECO:0000313|EMBL:ERI82520.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98788.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
FHA domain-containing protein
L2_023_000G1_scaffold_2566_6
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4419..8036
DNA (3618bp) protein (1206aa)
DNA and RNA helicase related protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HD88_9BIFI
DNA and RNA helicase related protein {ECO:0000313|EMBL:CDB24077.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_023_000G1_scaffold_2566_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8033..8287
DNA (255bp) protein (85aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=R6GS72_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI43903.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_000G1_scaffold_2566_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8389..9048)
DNA (660bp) protein (220aa)
SAF domain protein n=2 Tax=Bifidobacterium bifidum RepID=U2CES2_BIFBI
hypothetical protein
SAF domain protein {ECO:0000313|EMBL:EFR50966.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_023_000G1_scaffold_2566_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9200..9418)
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=R6GF75_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53734.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_2566_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9548..10240)
DNA (693bp) protein (231aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
5-formyltetrahydrofolate cyclo-ligase n=2 Tax=Bifidobacterium bifidum RepID=U2DS03_BIFBI
hypothetical protein
L2_023_000G1_scaffold_2566_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10290..10997
DNA (708bp) protein (236aa)
rimJ; ribosomal-protein-alanine acetyl transferase (EC:2.3.1.128)
Ribosomal-protein-S5-alanine acetyltransferase {ECO:0000313|EMBL:KFI43899.1}; EC=2.3.1.128 {ECO:0000313|EMBL:KFI43899.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Ribosomal-protein-S5-alanine acetyltransferase n=5 Tax=Bifidobacterium RepID=E4NZ86_BIFBP
L2_023_000G1_scaffold_2566_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11022..12395
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DLV9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82527.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_023_000G1_scaffold_2566_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12571..12864
DNA (294bp) protein (98aa)
10 kDa chaperonin n=9 Tax=Bifidobacterium RepID=E3EMJ1_BIFBS
groS; chaperonin
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_2566_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13061..13819
DNA (759bp) protein (253aa)
Beta-lactamase n=3 Tax=Bifidobacterium RepID=I3WJT7_BIFBI
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AFL05150.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_2566_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13929..14528
DNA (600bp) protein (200aa)
MoxR-like ATPase n=4 Tax=Bifidobacterium RepID=K2I8S4_BIFBI
MoxR-like ATPase {ECO:0000313|EMBL:CDB24055.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
MoxR-like ATPase
L2_023_000G1_scaffold_2566_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


15220..15390
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=9 Tax=Bifidobacterium RepID=E3EMI8_BIFBS
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_023_000G1_scaffold_2566_17
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15509..16723
DNA (1215bp) protein (405aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=5 Tax=Bifidobacterium RepID=K2HXZ1_BIFBI
L2_023_000G1_scaffold_2566_18
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16848..17171
DNA (324bp) protein (108aa)
FdxC Ferredoxin n=7 Tax=Bifidobacterium RepID=E4NZ79_BIFBP
fdxA; ferredoxin
FdxC Ferredoxin {ECO:0000313|EMBL:CDB24051.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_2566_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17290..18468
DNA (1179bp) protein (393aa)
aminotransferase (EC:2.6.1.83)
Aminotransferase {ECO:0000313|EMBL:KFI43892.1}; EC=2.6.1.83 {ECO:0000313|EMBL:KFI43892.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Aminotransferase n=2 Tax=Bifidobacterium bifidum RepID=E4NZ78_BIFBP
L2_023_000G1_scaffold_2566_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18492..19784)
DNA (1293bp) protein (431aa)
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
DNA polymerase IV n=2 Tax=Bifidobacterium bifidum RepID=E4NZ77_BIFBP
Displaying 20 items

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