ggKbase home page

L2_023_000G1_scaffold_9620

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_9620_1
unknown

Not on your lists

97..276
DNA (180bp) protein (60aa)

This feature has no annotations

L2_023_000G1_scaffold_9620_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

281..1045
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYK9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20204.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_023_000G1_scaffold_9620_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1058..1252
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67823.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_023_000G1_scaffold_9620_4
unknown

Not on your lists

1265..1426
DNA (162bp) protein (54aa)

This feature has no annotations

L2_023_000G1_scaffold_9620_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1432..2154
DNA (723bp) protein (241aa)
Collagen triple helix repeat protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UG71_9FIRM
Collagen triple helix repeat protein {ECO:0000313|EMBL:CCZ67822.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_023_000G1_scaffold_9620_6
unknown

Not on your lists

2194..2721
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B3 RepID=R0AXH2_9CLOT
L2_023_000G1_scaffold_9620_7
unknown

Not on your lists

comp(2740..3210)
DNA (471bp) protein (157aa)

This feature has no annotations

L2_023_000G1_scaffold_9620_8
unknown

Not on your lists

3309..3728
DNA (420bp) protein (140aa)

This feature has no annotations

L2_023_000G1_scaffold_9620_9
unknown

Not on your lists

3728..3853
DNA (126bp) protein (42aa)

This feature has no annotations

L2_023_000G1_scaffold_9620_10
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3918..4334
DNA (417bp) protein (139aa)
Toxin secretion/phage lysis holin n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YKE1_9FIRM
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EPD64776.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
toxin secretion/phage lysis holin
L2_023_000G1_scaffold_9620_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4375..5412
DNA (1038bp) protein (346aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDN76763.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDN76763.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B5H6_RUMGN
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L2_023_000G1_scaffold_9620_12
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5686..6153)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZLJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD64779.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L2_023_000G1_scaffold_9620_13
unknown

Not on your lists

comp(6175..6363)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_023_000G1_scaffold_9620_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6385..6810)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B869_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76162.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
Displaying 14 items

View Taxonomy