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L2_023_000G1_scaffold_1033

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_1033_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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134..760
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GG38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99231.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted metal-dependent hydrolase
L2_023_000G1_scaffold_1033_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(764..952)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GG39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99232.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_023_000G1_scaffold_1033_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1102..1485
DNA (384bp) protein (128aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GG40_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55815.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_1033_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1566..1739
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GG41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99234.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_023_000G1_scaffold_1033_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1780..2874
DNA (1095bp) protein (365aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CBL09884.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CBL09884.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSN2_9FIRM
L2_023_000G1_scaffold_1033_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2966..4516)
DNA (1551bp) protein (517aa)
CTP synthase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
CTP synthase n=3 Tax=Roseburia RepID=D4L026_9FIRM
L2_023_000G1_scaffold_1033_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4785..6944
DNA (2160bp) protein (720aa)
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458, ECO:0000313|EMBL:CBL09886.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Roseburia intestinalis RepID=D4KSN4_9FIRM
L2_023_000G1_scaffold_1033_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7052..8932
DNA (1881bp) protein (627aa)
UvrABC system protein C n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AXP9_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
excinuclease ABC, C subunit
L2_023_000G1_scaffold_1033_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9005..9946
DNA (942bp) protein (314aa)
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.4.- 2.7.11.-)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
HPr kinase/phosphorylase n=4 Tax=Roseburia RepID=D4KSN5_9FIRM
L2_023_000G1_scaffold_1033_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9992..11392
DNA (1401bp) protein (467aa)
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387, ECO:0000313|EMBL:CBL12962.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
M18 family aminopeptidase n=2 Tax=Roseburia intestinalis RepID=D4L022_9FIRM
L2_023_000G1_scaffold_1033_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11414..12322
DNA (909bp) protein (303aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Roseburia intestinalis RepID=D4L021_9FIRM
L2_023_000G1_scaffold_1033_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12366..13241
DNA (876bp) protein (292aa)
UPF0042 nucleotide-binding protein ROI_30040 n=4 Tax=Roseburia RepID=D4KSN8_9FIRM
Predicted P-loop-containing kinase
Nucleotide-binding protein ROSINTL182_05100 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_1033_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13245..14138
DNA (894bp) protein (298aa)
Putative sporulation transcription regulator WhiA n=4 Tax=Roseburia RepID=D4KSN9_9FIRM
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_1033_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14312..14563
DNA (252bp) protein (84aa)
Phosphotransferase System HPr (HPr) Family n=3 Tax=Roseburia intestinalis RepID=D4L018_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CBL12958.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_1033_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14585..15487
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KSP1_9FIRM
conserved protein of unknown function cotranscribed with Bmr (bmrU)
Putative phage tail component domain protein {ECO:0000313|EMBL:EEV03016.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_1033_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15580..16446
DNA (867bp) protein (289aa)
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist {ECO:0000313|EMBL:CBL09894.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBL09894.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist n=4 Tax=Roseburia RepID=D4KSP2_9FIRM
L2_023_000G1_scaffold_1033_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16834..18954
DNA (2121bp) protein (707aa)
Uncharacterized protein related to glutamine synthetase {ECO:0000313|EMBL:CBL09895.1}; EC=6.3.1.2 {ECO:0000313|EMBL:CBL09895.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein related to glutamine synthetase n=3 Tax=Roseburia RepID=D4KSP3_9FIRM
L2_023_000G1_scaffold_1033_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19121..19459
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=3 Tax=Roseburia intestinalis RepID=D4KSP5_9FIRM
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EEV03012.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_1033_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19531..20937
DNA (1407bp) protein (469aa)
Ammonium transporter n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSP6_9FIRM
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002, ECO:0000313|EMBL:CBL09898.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_1033_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21340..21675
DNA (336bp) protein (112aa)
Nucleotidyltransferase domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSP7_9FIRM
Nucleotidyltransferase domain.
Nucleotidyltransferase domain {ECO:0000313|EMBL:CBL09899.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_1033_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21684..21839
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSP8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09900.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_1033_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21930..22268
DNA (339bp) protein (113aa)
Predicted nucleotidyltransferases n=2 Tax=Roseburia intestinalis RepID=D4KSP9_9FIRM
Predicted nucleotidyltransferases
Predicted nucleotidyltransferases {ECO:0000313|EMBL:CBL09901.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_1033_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22261..22638
DNA (378bp) protein (126aa)
HEPN domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5D0_9FIRM
HEPN domain protein {ECO:0000313|EMBL:EEV03007.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_023_000G1_scaffold_1033_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22833..24155)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BR64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55782.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_1033_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24355..28578
DNA (4224bp) protein (1408aa)
Putative serine/threonine protein kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B9R2_9FIRM
Putative serine/threonine protein kinase {ECO:0000313|EMBL:CDA55781.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
NB-ARC domain./Protein kinase domain.
L2_023_000G1_scaffold_1033_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28704..28892
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G5C5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55780.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_1033_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28948..29319
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSQ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09905.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_1033_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29493..29768
DNA (276bp) protein (92aa)
Mor transcription activator family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSQ4_9FIRM
Mor transcription activator family {ECO:0000313|EMBL:CDA55768.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Mor transcription activator family.
L2_023_000G1_scaffold_1033_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29811..30044
DNA (234bp) protein (78aa)
Uncharacterized protein/domain associated with GTPases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSQ5_9FIRM
Uncharacterized protein/domain associated with GTPases
Uncharacterized protein/domain associated with GTPases {ECO:0000313|EMBL:CBL09907.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_1033_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30078..30272
DNA (195bp) protein (65aa)
Uncharacterized protein/domain associated with GTPases n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSQ5_9FIRM
Uncharacterized protein/domain associated with GTPases
Uncharacterized protein/domain associated with GTPases {ECO:0000313|EMBL:CDA55767.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying items 1-30 of 107 in total

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