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L2_023_000G1_scaffold_1203

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_1203_1
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(239..664)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CI77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64992.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Protein of unknown function (DUF1492).
L2_023_000G1_scaffold_1203_2
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(857..1168)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HEP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00007.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Protein of unknown function (DUF551).
L2_023_000G1_scaffold_1203_3
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1170..1385)
DNA (216bp) protein (72aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CPN6_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48206.1}; Flags: Fragment;; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L2_023_000G1_scaffold_1203_4
unknown

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comp(1414..1503)
DNA (90bp) protein (30aa)

This feature has no annotations

L2_023_000G1_scaffold_1203_5
unknown

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comp(1537..1713)
DNA (177bp) protein (59aa)

This feature has no annotations

L2_023_000G1_scaffold_1203_6
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1706..2593)
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XD30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20788.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L2_023_000G1_scaffold_1203_7
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2620..3165)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XD29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20787.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Holliday junction resolvase
L2_023_000G1_scaffold_1203_8
unknown

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comp(3184..3933)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003680991
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39772.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_023_000G1_scaffold_1203_9
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3948..4373)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035EF995
Uncharacterized protein {ECO:0000313|EMBL:EDR48582.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L2_023_000G1_scaffold_1203_10
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4399..5235)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QUX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF42377.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
RecT protein
L2_023_000G1_scaffold_1203_11
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5246..6181)
DNA (936bp) protein (312aa)
Putative phage-type endonuclease n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TDL2_9CLOT
Putative phage-type endonuclease {ECO:0000313|EMBL:CCZ61364.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
putative phage-type endonuclease
L2_023_000G1_scaffold_1203_12
unknown

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comp(6184..6375)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_023_000G1_scaffold_1203_13
unknown

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comp(6365..6559)
DNA (195bp) protein (65aa)

This feature has no annotations

L2_023_000G1_scaffold_1203_14
unknown

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comp(6651..6848)
DNA (198bp) protein (66aa)

This feature has no annotations

L2_023_000G1_scaffold_1203_15
unknown

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comp(6856..7113)
DNA (258bp) protein (86aa)

This feature has no annotations

L2_023_000G1_scaffold_1203_16
unknown

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comp(7187..7348)
DNA (162bp) protein (54aa)

This feature has no annotations

L2_023_000G1_scaffold_1203_17
unknown

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comp(7440..7598)
DNA (159bp) protein (53aa)

This feature has no annotations

L2_023_000G1_scaffold_1203_18
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7709..7930)
DNA (222bp) protein (74aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RCZ9_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC46753.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L2_023_000G1_scaffold_1203_19
unknown

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comp(7985..8080)
DNA (96bp) protein (32aa)

This feature has no annotations

L2_023_000G1_scaffold_1203_20
unknown

Not on your lists

comp(8178..8300)
DNA (123bp) protein (41aa)

This feature has no annotations

L2_023_000G1_scaffold_1203_21
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8443..9078
DNA (636bp) protein (212aa)
Putative repressor LexA n=1 Tax=Eubacterium sp. CAG:156 RepID=R5ZK71_9FIRM
Putative repressor LexA {ECO:0000313|EMBL:CDA29302.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
SOS-response transcriptional repressor, LexA
L2_023_000G1_scaffold_1203_22
Brachybacterium faecium, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9131..10078
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Brachybacterium squillarum RepID=UPI0002629412
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU85604.1}; TaxID=446465 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860).;"
L2_023_000G1_scaffold_1203_23
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10289..10465
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A7V7_NATTJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB84405.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
L2_023_000G1_scaffold_1203_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10462..11073
DNA (612bp) protein (204aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium difficile P59 RepID=T4SU74_CLODI
hypothetical protein
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EQE68014.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_000G1_scaffold_1203_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11228..12220
DNA (993bp) protein (331aa)
Site-specific recombinase XerD n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUA6_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL10946.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_1203_26
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12540..13256)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31211.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
prophage antirepressor
L2_023_000G1_scaffold_1203_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13324..14322)
DNA (999bp) protein (333aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AU02_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ERI62868.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
N-acetylmuramoyl-L-alanine amidase family 2 protein
L2_023_000G1_scaffold_1203_28

Not on your lists

comp(14376..14669)
DNA (294bp) protein (98aa)
Phage holin n=1 Tax=gut metagenome RepID=J9GTL2_9ZZZZ
Phage holin {ECO:0000313|EMBL:EJX03695.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L2_023_000G1_scaffold_1203_29
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(14679..14990)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RNS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46984.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_023_000G1_scaffold_1203_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15002..16354)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00635.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
Displaying items 1-30 of 50 in total

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