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L2_023_000G1_scaffold_1218

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_1218_1
unknown

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

L2_023_000G1_scaffold_1218_2
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(250..1269)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AMH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85558.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
mglB; D-galactose-binding periplasmic protein
L2_023_000G1_scaffold_1218_3
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1447..2511)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2XTJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55648.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
LacI family transcriptional regulator
L2_023_000G1_scaffold_1218_4
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2511..3422)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YFT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD63403.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
sugar ABC transporter periplasmic protein
L2_023_000G1_scaffold_1218_5
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3419..5203)
DNA (1785bp) protein (595aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Cache domain./Histidine kinase./HAMP domain. (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RWJ6_9FIRM
L2_023_000G1_scaffold_1218_6
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5203..6810)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y007_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55645.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
AraC family transcriptional regulator
L2_023_000G1_scaffold_1218_7
unknown

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comp(6800..6910)
DNA (111bp) protein (37aa)

This feature has no annotations

L2_023_000G1_scaffold_1218_8
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6930..8417)
DNA (1488bp) protein (496aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=2 Tax=Coprococcus RepID=S2YGQ0_9FIRM
L2_023_000G1_scaffold_1218_9
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8468..9637)
DNA (1170bp) protein (390aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
galactokinase (EC:2.7.1.6)
Galactokinase n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AMI4_9FIRM
L2_023_000G1_scaffold_1218_10
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9909..11741
DNA (1833bp) protein (611aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RWK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85565.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L2_023_000G1_scaffold_1218_11
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11735..13489
DNA (1755bp) protein (585aa)
hydrogenases, Fe-only (EC:1.6.5.3)
[FeFe] hydrogenase, group A n=2 Tax=Lachnospiraceae RepID=S2XUE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85566.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L2_023_000G1_scaffold_1218_12
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13671..14588)
DNA (918bp) protein (306aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RWK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85567.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ArsR family transcriptional regulator
L2_023_000G1_scaffold_1218_13
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14748..15695
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AMI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85568.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L2_023_000G1_scaffold_1218_14
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15857..16507
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RWK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74420.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
PAP2 superfamily.
L2_023_000G1_scaffold_1218_15
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16690..18363)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YGR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD63421.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ABC transporter
L2_023_000G1_scaffold_1218_16
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18363..20423)
DNA (2061bp) protein (687aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AMJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85571.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ABC transporter
L2_023_000G1_scaffold_1218_17
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20423..20797)
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RWL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74427.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L2_023_000G1_scaffold_1218_18
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21081..22574)
DNA (1494bp) protein (498aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AMJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85574.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
choline/carnitine/betaine transport
L2_023_000G1_scaffold_1218_19
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22589..22786)
DNA (198bp) protein (66aa)
betaine reductase complex component B subunit gamma (EC:1.21.4.2)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RWL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74429.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L2_023_000G1_scaffold_1218_20
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22850..23893)
DNA (1044bp) protein (348aa)
glycine reductase complex component B subunit gamma (EC:1.21.4.2)
Betaine reductase complex component B subunit beta n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z095_9FIRM
Betaine reductase complex component B subunit beta {ECO:0000313|EMBL:EPD63427.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L2_023_000G1_scaffold_1218_21
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23908..25233)
DNA (1326bp) protein (442aa)
Betaine reductase complex component B subunit alpha n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AMJ7_9FIRM
Betaine reductase complex component B subunit alpha {ECO:0000313|EMBL:EGG85577.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
glycine/sarcosine/betaine reductase component B subunit alpha
L2_023_000G1_scaffold_1218_22
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25472..26125
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZHJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD63429.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
transcriptional regulator, TetR family
L2_023_000G1_scaffold_1218_23
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26249..27373)
DNA (1125bp) protein (375aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XZY9_9FIRM
L2_023_000G1_scaffold_1218_24
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27567..29759)
DNA (2193bp) protein (731aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase 3 n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AMK0_9FIRM
L2_023_000G1_scaffold_1218_25
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30022..30771)
DNA (750bp) protein (250aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=2 Tax=Lachnospiraceae RepID=F3AMK1_9FIRM
L2_023_000G1_scaffold_1218_26
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30782..31606)
DNA (825bp) protein (275aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AMK2_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L2_023_000G1_scaffold_1218_27
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31603..32493)
DNA (891bp) protein (297aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AMK3_9FIRM
ABC-type cobalt transport system, ATPase component
L2_023_000G1_scaffold_1218_28
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32478..33329)
DNA (852bp) protein (284aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XZY4_9FIRM
ABC-type cobalt transport system, ATPase component
L2_023_000G1_scaffold_1218_29
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33465..33983)
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Lachnospiraceae RepID=E9RWN3_9FIRM
L2_023_000G1_scaffold_1218_30
unknown

Not on your lists

comp(34092..34316)
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying items 1-30 of 60 in total

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