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L2_023_000G1_scaffold_21

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Displaying items 1-30 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_21_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1331..2170
DNA (840bp) protein (280aa)
Uncharacterized protein n=204 Tax=Clostridium difficile RepID=Q18CK0_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL28972.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_023_000G1_scaffold_21_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2167..3348
DNA (1182bp) protein (394aa)
YbbR-like protein n=19 Tax=Clostridium difficile RepID=G6BQR0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS96846.1}; YbbR-like protein {ECO:0000313|EMBL:CDS83058.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative exported protein
L2_023_000G1_scaffold_21_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3652..4554
DNA (903bp) protein (301aa)
phosphate butyryltransferase (EC:2.3.1.19)
Phosphate butyryltransferase {ECO:0000313|EMBL:CCK97949.1}; EC=2.3.1.19 {ECO:0000313|EMBL:CCK97949.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Phosphate butyryltransferase n=207 Tax=Clostridium difficile RepID=C9XIN4_CLODC
L2_023_000G1_scaffold_21_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4576..5655
DNA (1080bp) protein (360aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Probable butyrate kinase n=1 Tax=Clostridium difficile P51 RepID=T4S3X7_CLODI
buk; butyrate kinase
L2_023_000G1_scaffold_21_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5645..6322
DNA (678bp) protein (226aa)
Uncharacterized protein n=211 Tax=Clostridium difficile RepID=Q18CK2_CLOD6
ATP/GTP-binding protein
Putative exopolyphosphatase {ECO:0000313|EMBL:EQG78606.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_023_000G1_scaffold_21_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6365..6580
DNA (216bp) protein (72aa)
4Fe-4S binding domain protein n=212 Tax=Clostridium difficile RepID=C9XIN7_CLODC
ferredoxin
Putative 4Fe-4S ferredoxin, iron-sulfur binding domain protein, delta subunit {ECO:0000313|EMBL:CCK90477.1}; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T20.;"
L2_023_000G1_scaffold_21_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6609..7688
DNA (1080bp) protein (360aa)
Putative ferredoxin/flavodoxin oxidoreductase,alpha subunit {ECO:0000313|EMBL:CAJ66936.1}; EC=1.2.7.- {ECO:0000313|EMBL:CAJ66936.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
3-methyl-2-oxobutanoate dehydrogenase n=198 Tax=Clostridium difficile RepID=G6BHP5_CLODI
2-ketoisovalerate ferredoxin reductase
L2_023_000G1_scaffold_21_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7688..8440
DNA (753bp) protein (251aa)
Putative ferredoxin/flavodoxin oxidoreductase,beta subunit {ECO:0000313|EMBL:CCK94051.1}; EC=1.2.7.- {ECO:0000313|EMBL:CCK94051.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=219 Tax=Clostridium difficile RepID=D5Q951_CLODI
subunit of oxidoreductase
L2_023_000G1_scaffold_21_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8441..8998
DNA (558bp) protein (186aa)
Putative ferredoxin/flavodoxin oxidoreductase,gamma subunit {ECO:0000313|EMBL:CCL21016.1}; EC=1.2.7.- {ECO:0000313|EMBL:CCL21016.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family protein n=213 Tax=Clostridium difficile RepID=C9XIP0_CLODC
subunit of oxidoreductase
L2_023_000G1_scaffold_21_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9108..10514
DNA (1407bp) protein (469aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Phosphoglucosamine mutase n=2 Tax=Clostridium difficile RepID=C9XIP1_CLODC
phosphoglucomutase/phosphomannomutase mutase
L2_023_000G1_scaffold_21_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10781..12613
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
glmS; Glucosamine--fructose-6-phosphateaminotransferas e [isomerizing] (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=169 Tax=Clostridium difficile RepID=T3IJ03_CLODC
L2_023_000G1_scaffold_21_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13065..14360
DNA (1296bp) protein (432aa)
Putative thiosulfate sulfurtransferase {ECO:0000313|EMBL:CDS82940.1}; EC=2.8.1.1 {ECO:0000313|EMBL:CDS82940.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative thiosulfate sulfurtransferase (EC:2.8.1.1)
Rhodanese-like domain protein n=6 Tax=Clostridium difficile RepID=T2W524_CLODI
L2_023_000G1_scaffold_21_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14830..15567
DNA (738bp) protein (246aa)
Uncharacterized protein n=171 Tax=Clostridium difficile RepID=G6BHQ1_CLODI
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CCL29055.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_023_000G1_scaffold_21_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15588..16841
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=216 Tax=Clostridium difficile RepID=C9XIP5_CLODC
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L2_023_000G1_scaffold_21_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16928..17992
DNA (1065bp) protein (355aa)
Stage II sporulation protein D n=153 Tax=Clostridium difficile RepID=T3IQ89_CLODC
spoIID; Stage II sporulation protein D
Stage II sporulation protein D {ECO:0000313|EMBL:CCL21082.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_023_000G1_scaffold_21_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18058..18726
DNA (669bp) protein (223aa)
Peptidase M23 family protein n=128 Tax=Clostridium difficile RepID=T3ILU3_CLODC
putative cell wall endopeptidase
Putative cell wall endopeptidase {ECO:0000313|EMBL:CAJ66945.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_023_000G1_scaffold_21_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18854..19084
DNA (231bp) protein (77aa)
Sporulation transcriptional regulator SpoIIID n=113 Tax=Clostridium difficile RepID=T3IK83_CLODC
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EQI95177.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
spoIIID; stage III sporulation protein D
L2_023_000G1_scaffold_21_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19281..20300
DNA (1020bp) protein (340aa)
Cell shape determining , MreB/Mrl family protein n=178 Tax=Clostridium difficile RepID=C9XIP9_CLODC
mreB1; rod shape-determining protein Mbl
Rod shape-determining protein MreB {ECO:0000313|EMBL:EHJ29857.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_023_000G1_scaffold_21_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20316..20744
DNA (429bp) protein (143aa)
fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein]dehy dratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000255|HAMAP-Rule:MF_00406}; Short=(3R)-hydroxymyristoyl-ACP dehydrase {ECO:0000255|HAMAP-Rule:MF_00406};; Beta-hydroxyacyl-ACP dehydratase {ECO:0000255|HAMAP-Rule:MF_00406}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=149 Tax=Clostridium difficile RepID=FABZ_CLOD6
L2_023_000G1_scaffold_21_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20855..21373)
DNA (519bp) protein (173aa)
Uncharacterized protein n=5 Tax=Clostridium difficile RepID=C9XIQ1_CLODC
hypothetical protein
Putative sporulation protein YyaC {ECO:0000313|EMBL:EHJ29859.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_023_000G1_scaffold_21_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21793..22986
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
S-adenosylmethionine synthase n=172 Tax=Clostridium difficile RepID=METK_CLOD6
S-adenosylmethionine synthetase
L2_023_000G1_scaffold_21_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23302..24399
DNA (1098bp) protein (366aa)
Uncharacterized protein n=136 Tax=Clostridium difficile RepID=G6B303_CLODI
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ34759.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_023_000G1_scaffold_21_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24663..26882
DNA (2220bp) protein (740aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Helicase, RecD/TraA family n=25 Tax=Clostridium difficile RepID=G6BHR1_CLODI
DNA-binding protein
L2_023_000G1_scaffold_21_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26885..27667
DNA (783bp) protein (261aa)
ComF family protein n=133 Tax=Clostridium difficile RepID=G6BHR2_CLODI
phosphoribosyl transferase
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EQE70582.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_000G1_scaffold_21_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27999..29912
DNA (1914bp) protein (638aa)
PRD domain protein n=2 Tax=Clostridium difficile RepID=T3H8R5_CLODI
Putative transcription antiterminator {ECO:0000313|EMBL:CBE01693.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
transcription antiterminator
L2_023_000G1_scaffold_21_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30053..30361
DNA (309bp) protein (103aa)
PTS system, IIa component n=218 Tax=Clostridium difficile RepID=C9XIQ7_CLODC
PTS system transporter subunit IIA
PTS system, lactose/cellobiose-family IIA component {ECO:0000313|EMBL:CCL29068.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_023_000G1_scaffold_21_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30385..30711
DNA (327bp) protein (109aa)
PTS system, IIb component n=212 Tax=Clostridium difficile RepID=C9XIQ8_CLODC
PTS system transporter subunit IIB
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EHJ34754.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_023_000G1_scaffold_21_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30750..32084
DNA (1335bp) protein (445aa)
PTS system, cellobiose-specific IIC component n=112 Tax=Clostridium difficile RepID=G6BHR6_CLODI
PTS system transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_000G1_scaffold_21_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32095..32613
DNA (519bp) protein (173aa)
Glycine/sarcosine/betaine reductase B n=95 Tax=Clostridium difficile RepID=G6BQT7_CLODI
SelenoB, glycine/betaine/sarcosine/D-proline reductase family protein {ECO:0000313|EMBL:EQE70599.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L2_023_000G1_scaffold_21_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32709..33668
DNA (960bp) protein (320aa)
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase {ECO:0000313|EMBL:CDS97158.1}; EC=3.5.1.26 {ECO:0000313|EMBL:CDS97158.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase (EC:3.5.1.26)
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase n=7 Tax=Clostridium difficile RepID=T2W4Y4_CLODI
Displaying items 1-30 of 188 in total

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