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L2_023_000G1_scaffold_29

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Displaying items 1-30 of 157 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_29_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

65..238
DNA (174bp) protein (58aa)
Uncharacterized protein n=54 Tax=Staphylococcus epidermidis RepID=Q8CSM0_STAES
hypothetical protein
Mid2-like cell wall stress sensor domain protein {ECO:0000313|EMBL:ESV19435.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_023_000G1_scaffold_29_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(395..1657)
DNA (1263bp) protein (421aa)
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex n=33 Tax=Staphylococcus epidermidis RepID=ODO2_STAES
L2_023_000G1_scaffold_29_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1676..4480)
DNA (2805bp) protein (935aa)
2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component {ECO:0000256|HAMAP-Rule:MF_01169, ECO:0000256|SAAS:SAAS00010308}; EC=1.2.4.2 {ECO:0000256|HAMAP-Rule:MF_01169, ECO:0000256|SAAS:SAAS00010306};; Alpha-ketoglutarate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01169}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
2-oxoglutarate dehydrogenase E1 component n=27 Tax=Staphylococcus epidermidis RepID=ODO1_STAES
L2_023_000G1_scaffold_29_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4895..6265)
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Signal transduction histidine-protein kinase ArlS n=26 Tax=Staphylococcus epidermidis RepID=ARLS_STAES
HAMP domain protein
L2_023_000G1_scaffold_29_5
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6262..6921)
DNA (660bp) protein (220aa)
Response regulator ArlR n=47 Tax=Staphylococcus epidermidis RepID=ARLR_STAES
Putative response regulator ArlR
Response regulator ArlR {ECO:0000313|EMBL:ETJ10030.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_023_000G1_scaffold_29_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7480..8247)
DNA (768bp) protein (256aa)
Uncharacterized HTH-type transcriptional regulator SE_1102 n=33 Tax=Staphylococcus epidermidis RepID=Y1102_STAES
deoR-like helix-turn-helix domain protein
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFE59754.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_29_7
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8254..9579)
DNA (1326bp) protein (442aa)
MATE domain protein n=14 Tax=Staphylococcus epidermidis RepID=H3UGP8_STAEP
matE family protein
MATE protein {ECO:0000313|EMBL:ETJ10032.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_023_000G1_scaffold_29_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9566..10420)
DNA (855bp) protein (285aa)
Ser/Thr phosphatase family protein n=9 Tax=Staphylococcus epidermidis RepID=C5QX32_STAEP
calcineurin-like phosphoesterase family protein
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EES36147.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_023_000G1_scaffold_29_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10434..11330)
DNA (897bp) protein (299aa)
Maltose/maltodextrin transport permease n=52 Tax=Staphylococcus epidermidis RepID=Q8CP81_STAES
binding--dependent transport system inner membrane component family protein
ABC transporter, permease protein {ECO:0000313|EMBL:EFE59751.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_29_10
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11346..13034)
DNA (1689bp) protein (563aa)
ABC transporter (Membrane spanning protein) n=26 Tax=Staphylococcus epidermidis RepID=Q8CMM4_STAES
bacterial extracellular solute-binding family protein
ABC transporter Membrane spanning protein {ECO:0000313|EMBL:ETJ10035.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_023_000G1_scaffold_29_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13046..14002)
DNA (957bp) protein (319aa)
ABC transporter, permease protein n=35 Tax=Staphylococcus epidermidis RepID=F9LLV0_STAEP
Protein lplB {ECO:0000313|EMBL:ESV19447.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
binding--dependent transport system inner membrane component family protein
L2_023_000G1_scaffold_29_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13999..15090)
DNA (1092bp) protein (364aa)
Multiple sugar-binding transport ATP-binding protein n=32 Tax=Staphylococcus epidermidis RepID=Q8CSL2_STAES
ABC transporter family protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE59748.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_29_13
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15441..16055)
DNA (615bp) protein (205aa)
Uncharacterized protein n=32 Tax=Staphylococcus epidermidis RepID=Q8CSL1_STAES
type 2 phosphatidic acid phosphatase family protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ10038.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_023_000G1_scaffold_29_14
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16068..17141)
DNA (1074bp) protein (358aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapepti de) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=32 Tax=Staphylococcus epidermidis RepID=MURG_STAEQ
L2_023_000G1_scaffold_29_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17159..17662)
DNA (504bp) protein (168aa)
Acetyltransferase, GNAT family n=41 Tax=Staphylococcus epidermidis RepID=Q5HPB9_STAEQ
Acetyltransferase (GNAT) family
Acetyltransferase, GNAT family {ECO:0000313|EMBL:AAW54356.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_023_000G1_scaffold_29_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17998..19473)
DNA (1476bp) protein (492aa)
Peptidase, S41 family {ECO:0000313|EMBL:EFE59744.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFE59744.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Probable CtpA-like serine protease n=29 Tax=Staphylococcus epidermidis RepID=CTPAL_STAES
putative CtpA-like serine protease
L2_023_000G1_scaffold_29_17
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19818..20042)
DNA (225bp) protein (75aa)
UPF0346 protein SE_1114 n=61 Tax=Staphylococcus epidermidis RepID=Y1114_STAES
hypothetical protein
UPF0346 protein Q614_SASC00361G0026 {ECO:0000256|HAMAP-Rule:MF_01538}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_023_000G1_scaffold_29_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20042..20542)
DNA (501bp) protein (167aa)
PTS system, glucose-specific IIA component (EC:2.7.1.69)
Glucose-specific phosphotransferase enzyme IIA component; EC=2.7.1.-;; EIIA-Glc; EIII-Glc; PTS system glucose-specific EIIA component; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Glucose-specific phosphotransferase enzyme IIA component n=56 Tax=Staphylococcus RepID=PTGA_STAEQ
L2_023_000G1_scaffold_29_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20555..20983)
DNA (429bp) protein (143aa)
Peptide methionine sulfoxide reductase MsrB (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB {ECO:0000255|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000255|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000255|HAMAP-Rule:MF_01400}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Peptide methionine sulfoxide reductase MsrB n=51 Tax=Staphylococcus RepID=MSRB_STAEQ
L2_023_000G1_scaffold_29_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20976..21503)
DNA (528bp) protein (176aa)
msrA2; peptide methionine sulfoxide reductase MsrA 2 (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Peptide methionine sulfoxide reductase MsrA n=3 Tax=Staphylococcus epidermidis RepID=H0DMH4_STAEP
L2_023_000G1_scaffold_29_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21606..22454)
DNA (849bp) protein (283aa)
EDD domain protein, DegV family n=9 Tax=Staphylococcus epidermidis RepID=F9LLW0_STAEP
Hypothetical protein DUF194, DegV family
DegV family protein {ECO:0000313|EMBL:AAW54363.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_023_000G1_scaffold_29_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22464..22949)
DNA (486bp) protein (162aa)
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase; Short=DHFR;; EC=1.5.1.3;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Dihydrofolate reductase n=44 Tax=Bacillales RepID=DYR_STAEQ
L2_023_000G1_scaffold_29_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22991..23947)
DNA (957bp) protein (319aa)
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
Thymidylate synthase n=141 Tax=Bacilli RepID=TYSY_STAEQ
L2_023_000G1_scaffold_29_24

Not on your lists

comp(24261..24923)
DNA (663bp) protein (221aa)
ABC transporter, ATP-binding protein n=25 Tax=Staphylococcus epidermidis RepID=C5Q969_STAEP
ABC transporter family protein
ABC superfamily ATP binding cassette transporter, binding protein {ECO:0000313|EMBL:ETJ18880.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_023_000G1_scaffold_29_25

Not on your lists

comp(24939..25988)
DNA (1050bp) protein (350aa)
Efflux ABC transporter, permease protein n=8 Tax=Staphylococcus epidermidis RepID=H3UHT1_STAEP
ABC transporter permease protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ18881.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_023_000G1_scaffold_29_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26201..26641)
DNA (441bp) protein (147aa)
PF06491 family protein n=5 Tax=Staphylococcus epidermidis RepID=H3V7M4_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE59733.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
L2_023_000G1_scaffold_29_27

Not on your lists

comp(26690..26950)
DNA (261bp) protein (87aa)
Uncharacterized protein n=77 Tax=Staphylococcus epidermidis RepID=Q5HPA6_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ18883.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_023_000G1_scaffold_29_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26962..27156)
DNA (195bp) protein (65aa)
Uncharacterized protein n=41 Tax=Staphylococcus epidermidis RepID=Q5HPA5_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59731.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_29_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27407..28111
DNA (705bp) protein (235aa)
Membrane protein, putative n=52 Tax=Staphylococcus epidermidis RepID=Q5HPA4_STAEQ
Putative preQ0 transporter
Membrane protein, putative {ECO:0000313|EMBL:AAW54378.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_023_000G1_scaffold_29_30

Not on your lists

28436..28831
DNA (396bp) protein (132aa)
Uncharacterized protein n=7 Tax=Staphylococcus epidermidis RepID=F3SV56_STAEP
RNase H family protein
EbsB family protein {ECO:0000313|EMBL:ETJ18886.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying items 1-30 of 157 in total

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