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L2_023_000G1_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_43_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..862
DNA (861bp) protein (287aa)
Putative N-acetylmuramoyl-L-alanine amidase, autolysin {ECO:0000313|EMBL:CDS93479.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CDS93479.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
cwp17; putative N-acetylmuramoyl-L-alanineamidase,autolysin cwp17 (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase family protein n=3 Tax=Clostridium difficile RepID=T4X0B0_CLODI
L2_023_000G1_scaffold_43_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1104..3017
DNA (1914bp) protein (638aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T2VY14_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS86109.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L2_023_000G1_scaffold_43_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3010..5229
DNA (2220bp) protein (740aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
UvrD/REP helicase N-terminal domain protein n=14 Tax=Clostridium difficile RepID=T2UYL2_CLODI
putative helicase, superfamily 1, UvrD-family
L2_023_000G1_scaffold_43_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5338..6168
DNA (831bp) protein (277aa)
PD-(D/E)XK nuclease superfamily protein n=78 Tax=Clostridium difficile RepID=C9XND4_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29116.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_023_000G1_scaffold_43_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6158..9625
DNA (3468bp) protein (1156aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044573}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044602};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01452, ECO:0000256|SAAS:SAAS00044578};; ATP-dependent helicase/nuclease AddB {ECO:0000256|HAMAP-Rule:MF_01452}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
addB; ATP-dependent nuclease subunit B (ATP-dependenthelicase addB), Superfamily 1 UvrD-family (EC:3.6.1.-)
ATP-dependent helicase/deoxyribonuclease subunit B n=6 Tax=Clostridium difficile RepID=T3HZU9_CLODI
L2_023_000G1_scaffold_43_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9625..13452
DNA (3828bp) protein (1276aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
addA; ATP-dependent nuclease subunit A (ATP-dependenthelicase addA) (EC:3.6.1.-)
ATP-dependent helicase/nuclease subunit A n=7 Tax=Clostridium difficile RepID=T2VXN8_CLODI
L2_023_000G1_scaffold_43_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13498..14709
DNA (1212bp) protein (404aa)
Exonuclease SbcCD, D subunit n=189 Tax=Clostridium difficile RepID=T3HX98_CLODC
sbcD; Nuclease SbcCD subunit D
Nuclease SbcCD subunit D {ECO:0000313|EMBL:CAJ67883.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_023_000G1_scaffold_43_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14696..18223
DNA (3528bp) protein (1176aa)
AAA domain protein n=7 Tax=Clostridium difficile RepID=T2VXV1_CLODI
Nuclease SbcCD subunit C {ECO:0000313|EMBL:CDS86120.1}; RecF/RecN/SMC protein {ECO:0000313|EMBL:CDS85576.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
sbcC; Nuclease SbcCD subunit C
L2_023_000G1_scaffold_43_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18354..19607
DNA (1254bp) protein (418aa)
Transporter associated domain protein n=28 Tax=Clostridium difficile RepID=T4I064_CLODI
modulator of ions transport
Putative membrane protein {ECO:0000313|EMBL:CCL29121.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_023_000G1_scaffold_43_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19756..20808
DNA (1053bp) protein (351aa)
Sporulation integral membrane protein YtvI n=111 Tax=Clostridium difficile RepID=G6BVP1_CLODI
hypothetical protein
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EQG77603.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_023_000G1_scaffold_43_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20898..22124
DNA (1227bp) protein (409aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Peptidase T n=7 Tax=Clostridium difficile RepID=T2VZI6_CLODI
pepT; peptidase T
L2_023_000G1_scaffold_43_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22331..23383
DNA (1053bp) protein (351aa)
Cell wall binding repeat 2 family protein n=7 Tax=Clostridium difficile RepID=T2VYH5_CLODI
Putative cell wall-binding protein {ECO:0000313|EMBL:CDS93501.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
cell surface protein
L2_023_000G1_scaffold_43_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23760..24329)
DNA (570bp) protein (190aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Phosphodiesterase, MJ0936 family protein n=7 Tax=Clostridium difficile RepID=T2VZ54_CLODI
phosphodiesterase
L2_023_000G1_scaffold_43_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24354..25154)
DNA (801bp) protein (267aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=218 Tax=Clostridium difficile RepID=C9XNE4_CLODC
inorganic polyphosphate/ATP-NAD kinase
L2_023_000G1_scaffold_43_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25289..26149
DNA (861bp) protein (287aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDS85591.1}; ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CDS93509.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDS93509.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ABC-type transport system, multidrug-familyATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=5 Tax=Clostridium difficile RepID=T3HZW7_CLODI
L2_023_000G1_scaffold_43_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26149..26835
DNA (687bp) protein (229aa)
ABC-2 transporter family protein n=196 Tax=Clostridium difficile RepID=C9XNE6_CLODC
ABC transporter permease
ABC-2 transporter family protein {ECO:0000313|EMBL:EQE67762.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_000G1_scaffold_43_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26887..27429
DNA (543bp) protein (181aa)
Uncharacterized protein n=174 Tax=Clostridium difficile RepID=T3I2Z6_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE67741.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_000G1_scaffold_43_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27508..27975
DNA (468bp) protein (156aa)
YbaK / prolyl-tRNA synthetases associated domain protein n=186 Tax=Clostridium difficile RepID=T3HZT5_CLODC
oligonucleotide binding protein
Putative oligonucleotide binding protein possibly involved in recognition/discrimination or editing of prolyl-tRNA {ECO:0000313|EMBL:CAJ67894.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_023_000G1_scaffold_43_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28684..29820
DNA (1137bp) protein (379aa)
bcd2; Butyryl-CoA dehydrogenase (EC:1.3.99.-)
Butyryl-CoA dehydrogenase n=185 Tax=Clostridium difficile RepID=Q18AQ1_CLOD6
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EFH14427.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
L2_023_000G1_scaffold_43_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29879..30661
DNA (783bp) protein (261aa)
Electron transfer flavoprotein beta-subunit n=205 Tax=Clostridium difficile RepID=C9XNF0_CLODC
electron transfer flavoprotein subunit beta
Electron transfer flavoproteins subunit beta {ECO:0000313|EMBL:CCK89850.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
L2_023_000G1_scaffold_43_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30680..31690
DNA (1011bp) protein (337aa)
Electron transfer flavoprotein alpha-subunit n=207 Tax=Clostridium difficile RepID=C9XNF1_CLODC
etfA2; electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha-subunit {ECO:0000313|EMBL:CBE03056.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_023_000G1_scaffold_43_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31709..32506
DNA (798bp) protein (266aa)
3-hydroxybutyryl-CoA dehydratase (Crotonase) {ECO:0000313|EMBL:CCL21180.1}; EC=4.2.1.55 {ECO:0000313|EMBL:CCL21180.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
3-hydroxybutyryl-CoA dehydratase n=165 Tax=Clostridium difficile RepID=C9XNF2_CLODC
crt2; 3-hydroxybutyryl-CoA dehydratase
L2_023_000G1_scaffold_43_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32604..33449
DNA (846bp) protein (282aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:CCL29135.1}; EC=1.1.1.157 {ECO:0000313|EMBL:CCL29135.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
3-hydroxybutyryl-CoA dehydrogenase n=208 Tax=Clostridium difficile RepID=C9XNF3_CLODC
3-hydroxybutyryl-CoA dehydrogenase
L2_023_000G1_scaffold_43_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33521..34711
DNA (1191bp) protein (397aa)
Acetyl-CoA C-acetyltransferase n=8 Tax=Clostridium difficile RepID=G6B8C9_CLODI
thlA1; acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CBE03061.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_023_000G1_scaffold_43_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34906..35808
DNA (903bp) protein (301aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Pseudouridine synthase n=107 Tax=Clostridium difficile RepID=G6BVQ6_CLODI
pseudouridylate synthase
L2_023_000G1_scaffold_43_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35822..36826
DNA (1005bp) protein (335aa)
Uncharacterized protein n=180 Tax=Clostridium difficile RepID=Q18AR5_CLOD6
hypothetical protein
Nucleoid-associated protein {ECO:0000313|EMBL:CKG92544.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS86153.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_023_000G1_scaffold_43_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36970..37197)
DNA (228bp) protein (76aa)
Acyl carrier protein n=222 Tax=Clostridium difficile RepID=C9XNF7_CLODC
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_023_000G1_scaffold_43_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37369..37794
DNA (426bp) protein (142aa)
Uncharacterized protein n=214 Tax=Clostridium difficile RepID=Q18AR3_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29140.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_023_000G1_scaffold_43_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37821..38048
DNA (228bp) protein (76aa)
Uncharacterized protein n=44 Tax=Clostridium difficile RepID=C9XNF9_CLODC
Uncharacterized protein {ECO:0000313|EMBL:EFH06929.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
hypothetical protein
L2_023_000G1_scaffold_43_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38230..38409
DNA (180bp) protein (60aa)
Uncharacterized protein n=197 Tax=Clostridium difficile RepID=C9YK20_CLODR
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQG77593.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Displaying items 1-30 of 163 in total

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