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L2_023_000G1_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_47_1
unknown

Not on your lists

57..380
DNA (324bp) protein (108aa)

This feature has no annotations

L2_023_000G1_scaffold_47_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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825..2612
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6R2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44736.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_023_000G1_scaffold_47_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2759..2992)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J760_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44737.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_023_000G1_scaffold_47_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2979..3401)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IR93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44738.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_023_000G1_scaffold_47_5
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3577..4341
DNA (765bp) protein (255aa)
Transcriptional regulator, GntR family n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CN30_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFE91601.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
GntR family transcriptional regulator
L2_023_000G1_scaffold_47_6
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4609..6876
DNA (2268bp) protein (756aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CN32_9FIRM
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein {ECO:0000313|EMBL:EFE91603.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
L2_023_000G1_scaffold_47_7
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6878..7342
DNA (465bp) protein (155aa)
2Fe-2S iron-sulfur cluster-binding domain protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CN33_9FIRM
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:EFE91604.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
(2Fe-2S)-binding domain-containing protein
L2_023_000G1_scaffold_47_8
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7345..8184
DNA (840bp) protein (280aa)
FAD binding domain in molybdopterin dehydrogenase n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2W9D2_9FIRM
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:ERL21261.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
molybdopterin dehydrogenase FAD-binding
L2_023_000G1_scaffold_47_9
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8214..9554
DNA (1341bp) protein (447aa)
Transporter gate domain protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CN35_9FIRM
Transporter gate domain protein {ECO:0000313|EMBL:EFE91606.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
nucleoside recognition domain-containing protein
L2_023_000G1_scaffold_47_10
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9593..10906
DNA (1314bp) protein (438aa)
Transporter gate domain protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2U8D7_9FIRM
Transporter gate domain protein {ECO:0000313|EMBL:ERL21259.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
nucleoside recognition domain-containing protein
L2_023_000G1_scaffold_47_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11281..13035
DNA (1755bp) protein (585aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWJ9_9CLOT
L2_023_000G1_scaffold_47_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13260..13823
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44740.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
topology modulation protein
L2_023_000G1_scaffold_47_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13820..15382
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44741.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Orn/Lys/Arg decarboxylase major region
L2_023_000G1_scaffold_47_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15400..15996
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J765_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44742.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
guanylate kinase
L2_023_000G1_scaffold_47_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16071..16934
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J765_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44742.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
6-phosphogluconate dehydrogenase
L2_023_000G1_scaffold_47_16
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17055..17732)
DNA (678bp) protein (226aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9YEF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26136.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
GntR family transcriptional regulator
L2_023_000G1_scaffold_47_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18132..18818
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40659.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Metal-dependent hydrolase
L2_023_000G1_scaffold_47_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18847..19758
DNA (912bp) protein (304aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
2-dehydropantoate 2-reductase n=2 Tax=Clostridium clostridioforme RepID=G5I0S6_9CLOT
Ketopantoate reductase PanE/ApbA
L2_023_000G1_scaffold_47_19
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19828..20655)
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97025.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
peptidase M28
L2_023_000G1_scaffold_47_20
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20705..21205)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNI1_9CLOT
Toxin-antitoxin biofilm protein TabA {ECO:0000313|EMBL:KJJ68294.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_023_000G1_scaffold_47_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21263..22042)
DNA (780bp) protein (260aa)
Dehydrogenase with different specificitity (EC:1.1.1.69)
Putative gluconate 5-dehydrogenase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EL91_9FIRM
Putative gluconate 5-dehydrogenase {ECO:0000313|EMBL:EEQ58430.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L2_023_000G1_scaffold_47_22
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22072..22836)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97022.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
GntR family transcriptional regulator
L2_023_000G1_scaffold_47_23
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23208..23915
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNH8_9CLOT
Colanic acid/biofilm transcriptional regulator {ECO:0000313|EMBL:KJJ68291.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
GntR family transcriptional regulator
L2_023_000G1_scaffold_47_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24084..25475
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EL86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ58425.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
citrate transporter
L2_023_000G1_scaffold_47_25
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25604..27742
DNA (2139bp) protein (713aa)
Acetophenone carboxylase alpha subunit {ECO:0000313|EMBL:KJJ68289.1}; EC=6.4.1.8 {ECO:0000313|EMBL:KJJ68289.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNH6_9CLOT
hydantoinase
L2_023_000G1_scaffold_47_26
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27749..28540
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97018.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L2_023_000G1_scaffold_47_27
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28568..29617
DNA (1050bp) protein (350aa)
2,3-diketo-L-gulonate reductase {ECO:0000313|EMBL:KJJ68287.1}; EC=1.1.1.130 {ECO:0000313|EMBL:KJJ68287.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
3-dehydro-L-gulonate 2-dehydrogenase (EC:1.1.1.130)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNH4_9CLOT
L2_023_000G1_scaffold_47_28
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29632..30084
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNH3_9CLOT
Toxin-antitoxin biofilm protein TabA {ECO:0000313|EMBL:KJJ68286.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_023_000G1_scaffold_47_29
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30235..31650)
DNA (1416bp) protein (472aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Signal transduction histidine kinase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTD5_9FIRM
Signal transduction histidine kinase
L2_023_000G1_scaffold_47_30
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31647..32351)
DNA (705bp) protein (235aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Clostridium sp. CAG:58 RepID=R6RIS4_9CLOT
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC48783.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Displaying items 1-30 of 183 in total

View Taxonomy