ggKbase home page

L2_023_000G1_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_58_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1101)
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F9C4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06966.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
LVIVD repeat-containing protein
L2_023_000G1_scaffold_58_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1121..2536)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K8G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41051.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L2_023_000G1_scaffold_58_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2539..3612)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=U2BXI9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94406.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_023_000G1_scaffold_58_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3597..4769)
DNA (1173bp) protein (391aa)
O-antigen polymerase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AC90_9CLOT
O-antigen polymerase {ECO:0000313|EMBL:EFD00568.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Lipid A core--O-antigen ligase-like protein
L2_023_000G1_scaffold_58_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4828..5952)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002F94939
Uncharacterized protein {ECO:0000313|EMBL:ETD70176.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L2_023_000G1_scaffold_58_6
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5945..6517)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZGC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA33271.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
acetyltransferase
L2_023_000G1_scaffold_58_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(6542..7723)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GW49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21580.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
glycosyl transferases group 1 family protein
L2_023_000G1_scaffold_58_8
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(7720..8805)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21582.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
glycosyltransferase
L2_023_000G1_scaffold_58_9
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8807..9328)
DNA (522bp) protein (174aa)
maa; maltose O-acetyltransferase (EC:2.3.1.79)
Cps5N n=1 Tax=Roseburia sp. CAG:380 RepID=R6VDH4_9FIRM
Cps5N {ECO:0000313|EMBL:CDC95155.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L2_023_000G1_scaffold_58_10
Lactococcus garvieae, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9369..10619)
DNA (1251bp) protein (417aa)
UDP-glucose dehydrogenase (EC:1.1.1.22)
Eps11H n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GPL3_9FIRM
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:CEF52355.1}; TaxID=1363 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus garvieae.;"
L2_023_000G1_scaffold_58_11
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10641..11717)
DNA (1077bp) protein (359aa)
UDP-glucuronate 5'-epimerase (EC:5.1.3.12)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6K1A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63866.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L2_023_000G1_scaffold_58_12
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11740..12870)
DNA (1131bp) protein (377aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEG90705.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG90705.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Glycosyltransferase (EC:2.4.1.57)
Uncharacterized glycosyltransferase n=1 Tax=Enterococcus faecium E4453 RepID=G9SV64_ENTFC
L2_023_000G1_scaffold_58_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12891..14309)
DNA (1419bp) protein (473aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Glycosyl transferase CpsE n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GL41_CLOSY
Glycosyl transferase CpsE {ECO:0000313|EMBL:EGA94425.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_023_000G1_scaffold_58_14
unknown

Not on your lists

comp(14313..14546)
DNA (234bp) protein (78aa)

This feature has no annotations

L2_023_000G1_scaffold_58_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14640..15320)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95379.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L2_023_000G1_scaffold_58_16
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15357..16430)
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97074.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
cell envelope-related function transcriptional attenuator common domain
L2_023_000G1_scaffold_58_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16414..17178)
DNA (765bp) protein (255aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RK85_9CLOT
Capsular exopolysaccharide family protein {ECO:0000313|EMBL:ENZ33753.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
capsular exopolysaccharide family
L2_023_000G1_scaffold_58_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17179..17928)
DNA (750bp) protein (250aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R0AJ03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ52175.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Capsular polysaccharide biosynthesis protein
L2_023_000G1_scaffold_58_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17966..18679)
DNA (714bp) protein (238aa)
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X7N1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ11326.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L2_023_000G1_scaffold_58_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18708..19196)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59530.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_023_000G1_scaffold_58_21
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19483..20016)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KP22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63877.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
LytT; response regulator of the LytR/AlgR family
L2_023_000G1_scaffold_58_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20190..21578)
DNA (1389bp) protein (463aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.4.1.13 1.4.1.14 1.97.-.-)
Glutamate synthase n=9 Tax=Clostridium RepID=G5I0N9_9CLOT
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:ENZ09597.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_023_000G1_scaffold_58_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21578..22468)
DNA (891bp) protein (297aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43424.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_023_000G1_scaffold_58_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22599..23510)
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZAP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47221.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Galactose mutarotase and related enzymes
L2_023_000G1_scaffold_58_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23620..24132)
DNA (513bp) protein (171aa)
Dihydrofolate reductase n=3 Tax=Clostridium bolteae RepID=N9ZHB9_9CLOT
Dihydrofolate reductase {ECO:0000313|EMBL:ENZ39231.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
dihydrofolate reductase subunit
L2_023_000G1_scaffold_58_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24129..24629)
DNA (501bp) protein (167aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3B3_9CLOT
L2_023_000G1_scaffold_58_27
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24762..26156)
DNA (1395bp) protein (465aa)
Amino acid carrier protein n=2 Tax=Eubacterium RepID=C0ES99_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EEG37846.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
amino acid carrier protein
L2_023_000G1_scaffold_58_28
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

26354..27277
DNA (924bp) protein (308aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJF7_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ33077.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Transcriptional regulator
L2_023_000G1_scaffold_58_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27302..27808
DNA (507bp) protein (169aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Superoxide dismutase [Cu-Zn] n=8 Tax=Clostridium clostridioforme RepID=G5I0P7_9CLOT
hypothetical protein
L2_023_000G1_scaffold_58_30
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27932..31516)
DNA (3585bp) protein (1195aa)
Cell wall surface protein n=2 Tax=Streptococcus RepID=F5X5T4_STRPX
Cell wall surface protein {ECO:0000313|EMBL:KED04906.1}; Flags: Fragment;; TaxID=1051981 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. ruminatorum CECT 5772.;"
cell wall surface protein
Displaying items 1-30 of 134 in total

View Taxonomy