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L2_023_000G1_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_65_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..6292)
DNA (6291bp) protein (2097aa)
Putative uncharacterized protein (Fragment) n=7 Tax=Clostridium clostridioforme RepID=G5I0Q3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ63220.1}; Flags: Fragment;; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_023_000G1_scaffold_65_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6697..7860
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42620.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
abortive infection protein
L2_023_000G1_scaffold_65_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7891..9066)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XKT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ15961.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
DNA-binding transcriptional activator of the SARP family
L2_023_000G1_scaffold_65_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9111..9614)
DNA (504bp) protein (168aa)
Transcription elongation factor GreA n=1 Tax=Clostridium sp. CAG:7 RepID=R5J114_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transcription elongation factor
L2_023_000G1_scaffold_65_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9811..10761)
DNA (951bp) protein (317aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKH2_9CLOT
dihydrouridine synthase DuS
L2_023_000G1_scaffold_65_6
unknown

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10863..10955
DNA (93bp) protein (31aa)

This feature has no annotations

L2_023_000G1_scaffold_65_7
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11053..11961)
DNA (909bp) protein (303aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RRX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76128.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
auxin efflux carrier family protein
L2_023_000G1_scaffold_65_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12104..13411)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43638.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
dctM; putative TRAP C4-dicarboxylate transport system permease
L2_023_000G1_scaffold_65_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13408..13911)
DNA (504bp) protein (168aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHD4_9FIRM
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:EEQ57619.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
dctQ; putative TRAP C4-dicarboxylate transport system DctQ subunit
L2_023_000G1_scaffold_65_10
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13913..14923)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99610.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
dctP; putative TRAP C4-dicarboxylate transport system DctP subunit
L2_023_000G1_scaffold_65_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15135..15947)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J0W3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42646.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
two component transcriptional regulator, AraC family
L2_023_000G1_scaffold_65_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15971..17419)
DNA (1449bp) protein (483aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RS97_9CLOT
integral membrane sensor signal transduction histidine kinase
L2_023_000G1_scaffold_65_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17525..17743)
DNA (219bp) protein (73aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RS98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ14444.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Predicted transcriptional regulator
L2_023_000G1_scaffold_65_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17919..18134
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42649.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_023_000G1_scaffold_65_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18171..18878)
DNA (708bp) protein (236aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16481.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
GntR family transcriptional regulator
L2_023_000G1_scaffold_65_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18971..19777)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J0W8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42651.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
short-chain dehydrogenase/reductase SDR
L2_023_000G1_scaffold_65_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19863..20705)
DNA (843bp) protein (281aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J138_9CLOT
L2_023_000G1_scaffold_65_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21028..22254
DNA (1227bp) protein (409aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
6-phosphofructokinase (EC:2.7.1.11)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKK0_9CLOT
L2_023_000G1_scaffold_65_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22383..23435)
DNA (1053bp) protein (351aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQW1_9CLOT
L2_023_000G1_scaffold_65_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23617..24486
DNA (870bp) protein (290aa)
AraC family transcriptional regulator n=10 Tax=Clostridium RepID=N9WF32_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:ENZ59778.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
AraC family transcriptional regulator
L2_023_000G1_scaffold_65_21
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24514..25455
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFX8_9CLOT
Radical SAM superfamily protein {ECO:0000313|EMBL:KJJ69373.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
radical SAM protein
L2_023_000G1_scaffold_65_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26285..27640)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHF8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEQ57643.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
putative efflux protein, MATE family
L2_023_000G1_scaffold_65_23
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27888..28451
DNA (564bp) protein (188aa)
Putative manganese efflux pump MntP n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D585_9CLOT
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_023_000G1_scaffold_65_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28579..29322)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42675.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
choline binding protein G
L2_023_000G1_scaffold_65_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29370..30596)
DNA (1227bp) protein (409aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=4 Tax=Clostridium RepID=N9XGU8_9CLOT
L2_023_000G1_scaffold_65_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31361..32392
DNA (1032bp) protein (344aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKM1_9CLOT
L2_023_000G1_scaffold_65_27
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32500..33348)
DNA (849bp) protein (283aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Undecaprenyl-diphosphatase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFY8_9CLOT
undecaprenol kinase
L2_023_000G1_scaffold_65_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33431..34111)
DNA (681bp) protein (227aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J168_9CLOT
L2_023_000G1_scaffold_65_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34165..34926)
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQY6_9CLOT
Imidazole glycerol phosphate synthase cyclase subunit
L2_023_000G1_scaffold_65_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34970..35584)
DNA (615bp) protein (205aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Clostridium sp. CAG:7 RepID=R5J0Z7_9CLOT
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Displaying items 1-30 of 126 in total

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