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L2_023_000G1_scaffold_89

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_89_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..386
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99564.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_023_000G1_scaffold_89_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

433..1119
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GQ04_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93264.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_023_000G1_scaffold_89_3
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1308..1583
DNA (276bp) protein (92aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CR32_9FIRM
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EFE90334.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
addiction module antitoxin
L2_023_000G1_scaffold_89_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1580..1870
DNA (291bp) protein (97aa)
Addiction module toxin, RelE/StbE family n=3 Tax=Clostridium RepID=D6DKM4_CLOSC
addiction module toxin, RelE/StbE family
Uncharacterized protein {ECO:0000313|EMBL:EHF06406.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L2_023_000G1_scaffold_89_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2250..2432)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WWA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX68381.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_023_000G1_scaffold_89_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2436..2834)
DNA (399bp) protein (133aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Clostridium hathewayi RepID=D3ABT8_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EFD00761.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L2_023_000G1_scaffold_89_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3536..4231)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27680.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
walR1; transcriptional regulatory protein WalR
L2_023_000G1_scaffold_89_8
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4522..4917)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M0B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64440.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L2_023_000G1_scaffold_89_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4923..5837)
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3ABQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61623.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_023_000G1_scaffold_89_10
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5961..6437)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TI99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69444.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L2_023_000G1_scaffold_89_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6445..7437)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99551.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_023_000G1_scaffold_89_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7636..8772)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BW60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI76058.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_023_000G1_scaffold_89_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8980..9693
DNA (714bp) protein (238aa)
LytTr DNA-binding domain protein n=2 Tax=Oscillibacter RepID=U2R578_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ERK68336.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
lytT; response regulator
L2_023_000G1_scaffold_89_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9728..9964)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QM93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68337.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_023_000G1_scaffold_89_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9977..10291)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QM93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68337.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_023_000G1_scaffold_89_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10325..11221)
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QM93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68337.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_023_000G1_scaffold_89_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11259..11606
DNA (348bp) protein (116aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LJ70_9FIRM
Signal transduction histidine kinase
L2_023_000G1_scaffold_89_18
unknown

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11621..11884
DNA (264bp) protein (88aa)

This feature has no annotations

L2_023_000G1_scaffold_89_19
unknown

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12052..12348
DNA (297bp) protein (99aa)

This feature has no annotations

L2_023_000G1_scaffold_89_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12567..15323
DNA (2757bp) protein (919aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44223.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
sigma-54 interacting domain-containing protein
L2_023_000G1_scaffold_89_21
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15357..15770
DNA (414bp) protein (138aa)
PTS system fructose IIA component n=3 Tax=Anaerostipes RepID=B0MII3_9FIRM
PTS system fructose IIA protein {ECO:0000313|EMBL:EFV23508.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
PTS sugar transporter
L2_023_000G1_scaffold_89_22
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15844..16317
DNA (474bp) protein (158aa)
PTS system sorbose subfamily IIB component n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SPC0_9FIRM
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:EFP60620.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
PTS system mannose-specific transporter subunit IIB
L2_023_000G1_scaffold_89_23
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16337..17113
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JW84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS35522.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
PTS system sorbose-specific transporter subunit IIC
L2_023_000G1_scaffold_89_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17097..17963
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QZ12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45028.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L2_023_000G1_scaffold_89_25
Atopobium sp. oral taxon 810, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18073..18909
DNA (837bp) protein (279aa)
Membrane complex biogenesis protein, BtpA family n=1 Tax=Atopobium sp. oral taxon 810 str. F0209 RepID=U1XZT8_9ACTN
Membrane complex biogenesis protein, BtpA family {ECO:0000313|EMBL:ERI05507.1}; TaxID=1321773 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 810 str. F0209.;"
membrane complex biogenesis protein, BtpA family
L2_023_000G1_scaffold_89_26
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18906..19418
DNA (513bp) protein (171aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00108586}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00108586};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Tryptophan synthase alpha chain n=2 Tax=Coprococcus RepID=R6LA50_9FIRM
tryptophan synthase subunit alpha
L2_023_000G1_scaffold_89_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19795..20424)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P886_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12132.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_023_000G1_scaffold_89_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20676..21854
DNA (1179bp) protein (393aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Clostridium difficile F200 RepID=T4WLC6_CLODI
Transposase {ECO:0000313|EMBL:EFB77623.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative transposase for insertion sequence element
L2_023_000G1_scaffold_89_29
unknown

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comp(22066..22212)
DNA (147bp) protein (49aa)

This feature has no annotations

L2_023_000G1_scaffold_89_30
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(22328..23659)
DNA (1332bp) protein (444aa)
transcriptional regulator n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B3870F
Divergent AAA domain protein {ECO:0000313|EMBL:EEF69502.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
putative transcriptional regulator with HTH domain
Displaying items 1-30 of 141 in total

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