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L2_023_000G1_scaffold_100

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Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_100_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(397..660)
DNA (264bp) protein (88aa)
Integrase family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5I8_CLOSW
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADL03394.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_023_000G1_scaffold_100_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1030..2061
DNA (1032bp) protein (344aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=2 Tax=Clostridium RepID=B6FSX8_9CLOT
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EEA80870.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter permease subunit
L2_023_000G1_scaffold_100_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2058..2537
DNA (480bp) protein (160aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=2 Tax=Clostridium RepID=B6FSX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24014.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type enterochelin transport system, permease component
L2_023_000G1_scaffold_100_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2546..3037
DNA (492bp) protein (164aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=2 Tax=Clostridium RepID=B6FSX7_9CLOT
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EEA80869.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type enterochelin transport system, permease component
L2_023_000G1_scaffold_100_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3042..3794
DNA (753bp) protein (251aa)
ABC transporter ATPase subunit (EC:3.6.3.34)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FSX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24015.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_023_000G1_scaffold_100_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3845..4909
DNA (1065bp) protein (355aa)
Periplasmic binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2S4_9FIRM
Periplasmic binding protein {ECO:0000313|EMBL:EDM97396.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC-type enterochelin transport system, periplasmic component
L2_023_000G1_scaffold_100_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5116..5877
DNA (762bp) protein (254aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
tRNA pseudouridine synthase A n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVH2_9FIRM
tRNA pseudouridine synthase A
L2_023_000G1_scaffold_100_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5874..7052
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44649.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cation diffusion facilitator family transporter
L2_023_000G1_scaffold_100_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7106..7645
DNA (540bp) protein (180aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RIN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19304.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_023_000G1_scaffold_100_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8058..9248
DNA (1191bp) protein (397aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
trpB; tryptophan synthase beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5J480_9CLOT
L2_023_000G1_scaffold_100_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9241..10023
DNA (783bp) protein (261aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5INH8_9CLOT
L2_023_000G1_scaffold_100_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10070..10855
DNA (786bp) protein (262aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48)
indole-3-glycerol-phosphate synthase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000366F56B
L2_023_000G1_scaffold_100_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11374..12183
DNA (810bp) protein (270aa)
Acyl-ACP thioesterase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVF6_9FIRM
Acyl-ACP thioesterase {ECO:0000313|EMBL:EEQ62000.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
acyl-ACP thioesterase
L2_023_000G1_scaffold_100_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12241..13074
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J485_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43722.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RNA binding S1 domain-containing protein
L2_023_000G1_scaffold_100_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13134..14090
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43723.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_023_000G1_scaffold_100_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14284..15396
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43724.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC transporter
L2_023_000G1_scaffold_100_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15551..16639
DNA (1089bp) protein (363aa)
Uncharacterized protein n=17 Tax=Clostridium RepID=A8RIK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19286.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
CdaR family transcriptional regulator
L2_023_000G1_scaffold_100_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16655..17326
DNA (672bp) protein (224aa)
Cell division ATP-binding protein FtsE n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3W5_9CLOT
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CCY43726.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cell division ATP-binding protein FtsE
L2_023_000G1_scaffold_100_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17501..18268
DNA (768bp) protein (256aa)
Cell division protein FtsX n=1 Tax=Clostridium sp. CAG:7 RepID=R5J491_9CLOT
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_023_000G1_scaffold_100_20
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18311..19573
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95213.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Membrane-bound metallopeptidase
L2_023_000G1_scaffold_100_21
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19671..21005
DNA (1335bp) protein (445aa)
Putative CtpA-like serine protease {ECO:0000313|EMBL:KJJ68061.1}; EC=3.4.21.- {ECO:0000313|EMBL:KJJ68061.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTP9_9CLOT
carboxyl-terminal protease
L2_023_000G1_scaffold_100_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21242..22729
DNA (1488bp) protein (496aa)
ATP-dependent Lon protease, bacterial type (EC:3.4.21.53)
ATP-dependent Lon protease bacterial type n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P740_9FIRM
ATP-dependent Lon protease bacterial type {ECO:0000313|EMBL:CDC14331.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_023_000G1_scaffold_100_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22773..24032)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44135.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_023_000G1_scaffold_100_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24140..24952)
DNA (813bp) protein (271aa)
ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENS1_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEQ59801.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
binding-protein-dependent transport system inner membrane protein
L2_023_000G1_scaffold_100_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24945..25712)
DNA (768bp) protein (256aa)
NitT/TauT family ABC transporter ATP-binding protein n=2 Tax=Clostridium clostridioforme RepID=N9Y417_9CLOT
NitT/TauT family ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ06648.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC transporter
L2_023_000G1_scaffold_100_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25823..27376)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44124.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_023_000G1_scaffold_100_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27698..28138
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8S563_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP12553.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
histidine triad (HIT) protein
L2_023_000G1_scaffold_100_28
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28253..29539
DNA (1287bp) protein (429aa)
D-alanyl-D-alanine carboxypeptidase DacF {ECO:0000313|EMBL:KJJ68158.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KJJ68158.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HF59_9CLOT
L2_023_000G1_scaffold_100_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29654..30208)
DNA (555bp) protein (185aa)
NitT/TauT family ABC transporter substrate-binding protein n=9 Tax=Clostridium RepID=N9W3A3_9CLOT
NitT/TauT family ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ06636.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
sulfonate/nitrate/taurine transport system substrate-binding protein
L2_023_000G1_scaffold_100_30
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30227..32095)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06448.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Site-specific recombinase
Displaying items 1-30 of 139 in total

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