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L2_023_000G1_scaffold_171

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_171_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..697
DNA (696bp) protein (232aa)
ABC-type transport system, sugar-familyATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=15 Tax=Clostridium difficile RepID=T2XR37_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQE68494.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_000G1_scaffold_171_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

828..1850
DNA (1023bp) protein (341aa)
ABC transporter substrate binding protein n=140 Tax=Clostridium difficile RepID=G6BUQ2_CLODI
ABC transporter substrate binding family protein {ECO:0000313|EMBL:EQG78376.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
ABC transporter substrate-binding protein
L2_023_000G1_scaffold_171_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2014..2571)
DNA (558bp) protein (186aa)
Maltose transacetylase {ECO:0000313|EMBL:EQI88503.1}; EC=2.3.1.79 {ECO:0000313|EMBL:EQI88503.1};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Maltose O-acetyltransferase n=85 Tax=Clostridium difficile RepID=G6BUQ3_CLODI
maltose O-acetyltransferase
L2_023_000G1_scaffold_171_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2577..3641)
DNA (1065bp) protein (355aa)
ABC transporter, ATP-binding protein n=42 Tax=Clostridium difficile RepID=G6BUQ4_CLODI
modC; molybdenum ABC transporter ATP-binding protein
Putative molybdenum ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBE02858.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_023_000G1_scaffold_171_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3654..4403)
DNA (750bp) protein (250aa)
Molybdate ABC transporter, permease protein n=7 Tax=Clostridium difficile RepID=G6B6W3_CLODI
modB; molybdenum ABC transporter permease
ABC-type transport system, molybdenum-specific permease {ECO:0000313|EMBL:CCL20986.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_023_000G1_scaffold_171_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4486..5298)
DNA (813bp) protein (271aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=105 Tax=Clostridium difficile RepID=G6BUQ6_CLODI
Molybdate ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EQG78356.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
modA; ABC-type transport system, molybdenum-specificextracellular solute-binding protein
L2_023_000G1_scaffold_171_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5491..6420
DNA (930bp) protein (310aa)
DNA binding , excisionase family domain protein n=9 Tax=Clostridium difficile RepID=T2W124_CLODI
Putative molybdate binding regulator {ECO:0000313|EMBL:CDS84791.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84358.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L2_023_000G1_scaffold_171_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6581..7030)
DNA (450bp) protein (150aa)
Uncharacterized protein n=72 Tax=Clostridium difficile RepID=T2TQP9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG78311.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
conserved hypothetical protein
L2_023_000G1_scaffold_171_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7233..8213)
DNA (981bp) protein (327aa)
Dienelactone hydrolase family protein n=7 Tax=Clostridium difficile RepID=T2W0Z3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS84356.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
uncharacterised protein
L2_023_000G1_scaffold_171_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8418..9272)
DNA (855bp) protein (285aa)
Uncharacterized protein n=119 Tax=Clostridium difficile RepID=C9XM94_CLODC
hypothetical protein
Putative ADP-ribose binding protein {ECO:0000313|EMBL:CCL20981.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_023_000G1_scaffold_171_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9595..10923)
DNA (1329bp) protein (443aa)
6-phospho-alpha-glucosidase {ECO:0000313|EMBL:CDS84786.1}; EC=3.2.1.122 {ECO:0000313|EMBL:CDS84786.1};; Maltose-6'-phosphate glucosidase {ECO:0000313|EMBL:CDS84354.1}; EC=3.2.1.122 {ECO:0000313|EMBL:CDS84354.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
6-phospho-alpha-glucosidase n=173 Tax=Clostridium difficile RepID=C9XM93_CLODC
6-phospho-alpha-glucosidase
L2_023_000G1_scaffold_171_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11071..11400)
DNA (330bp) protein (110aa)
PTS system, IIa component n=163 Tax=Clostridium difficile RepID=C9XM92_CLODC
PTS system transporter subunit IIA
PTS system, Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:EQE68486.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_000G1_scaffold_171_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11424..12713)
DNA (1290bp) protein (430aa)
PTS system, lactose/cellobiose-family IIC membrane component n=163 Tax=Clostridium difficile RepID=Q18A55_CLOD6
PTS system, IIc component
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_023_000G1_scaffold_171_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12729..13055)
DNA (327bp) protein (109aa)
PTS system, IIb component n=202 Tax=Clostridium difficile RepID=C9XM90_CLODC
PTS system transporter subunit IIB
PTS system, lactose/cellobiose-family IIB component {ECO:0000313|EMBL:CCL32959.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_023_000G1_scaffold_171_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13190..13819)
DNA (630bp) protein (210aa)
MgsA AAA+ ATPase family protein n=211 Tax=Clostridium difficile RepID=C9XM89_CLODC
hypothetical protein
Recombination factor protein RarA {ECO:0000313|EMBL:CKH55959.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84780.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_023_000G1_scaffold_171_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14034..16691)
DNA (2658bp) protein (886aa)
Sigma-54 factor, interaction domain-containing protein,transcriptional regulatory protein levr {ECO:0000313|EMBL:CDT45222.1}; EC=2.7.1.- {ECO:0000313|EMBL:CDT45222.1};; Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDS84779.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
sigma-54 factor, interaction domain-containing protein,transcriptional regulatory protein levr (EC:2.7.1.-)
AAA domain family protein n=6 Tax=Clostridium difficile RepID=T3I3T2_CLODI
L2_023_000G1_scaffold_171_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17050..17994)
DNA (945bp) protein (315aa)
ABC transporter family protein n=44 Tax=Clostridium difficile RepID=T3I593_CLODC
ABC transporter family protein {ECO:0000313|EMBL:EQE68487.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
oppF; oligopeptide ABC transporter ATP-binding protein
L2_023_000G1_scaffold_171_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17987..19000)
DNA (1014bp) protein (338aa)
Oligopeptide ABC transporter%2C ATP-binding protein {ECO:0000313|EMBL:CKH56157.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH56157.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein n=18 Tax=Clostridium difficile RepID=T2UZZ0_CLODI
oppD; ABC transporter ATP-binding protein
L2_023_000G1_scaffold_171_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19087..20655)
DNA (1569bp) protein (523aa)
Bacterial extracellular solute-binding s, 5 Middle family protein n=147 Tax=Clostridium difficile RepID=T3I7C6_CLODC
oppA; ABC-type transport system, oligopeptide-familyextracellular solute-binding protein
Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:EQE68484.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_000G1_scaffold_171_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20768..21679)
DNA (912bp) protein (304aa)
Binding--dependent transport system inner membrane component family protein n=135 Tax=Clostridium difficile RepID=T3I2D9_CLODC
oppC; oligopeptide family ABC transporter permease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQG78313.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_023_000G1_scaffold_171_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21663..22685)
DNA (1023bp) protein (341aa)
ABC transporter, permease protein n=48 Tax=Clostridium difficile RepID=G6B6Y0_CLODI
ABC transporter, permease protein {ECO:0000313|EMBL:EHJ31389.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
oppB; oligopeptide ABC transporter permease
L2_023_000G1_scaffold_171_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22976..23410
DNA (435bp) protein (145aa)
Bacterial regulatory , arsR family protein n=197 Tax=Clostridium difficile RepID=T3I2G2_CLODC
Transcriptional regulator, MarR family
Bacterial regulatory , arsR family protein {ECO:0000313|EMBL:EQE68460.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_023_000G1_scaffold_171_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23413..23811
DNA (399bp) protein (133aa)
Eukaryotic cytochrome b561 family protein n=182 Tax=Clostridium difficile RepID=T3I3G5_CLODC
putative membrane protein
Eukaryotic cytochrome b561 family protein {ECO:0000313|EMBL:EQI88596.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L2_023_000G1_scaffold_171_24
unknown

Not on your lists

comp(23983..24087)
DNA (105bp) protein (35aa)

This feature has no annotations

L2_023_000G1_scaffold_171_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24261..24548)
DNA (288bp) protein (96aa)
NifU-like protein n=1 Tax=Clostridium difficile 70-100-2010 RepID=G6BUS4_CLODI
NifU-like protein {ECO:0000313|EMBL:EHJ31392.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L2_023_000G1_scaffold_171_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24520..25887)
DNA (1368bp) protein (456aa)
Putative glutamate carboxypeptidase {ECO:0000313|EMBL:CDT45087.1}; EC=3.5.1.- {ECO:0000313|EMBL:CDT45087.1};; p-aminobenzoyl-glutamate hydrolase subunit B {ECO:0000313|EMBL:CDS84768.1}; EC=3.5.1.- {ECO:0000313|EMBL:CDS84768.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
glutamate carboxypeptidase (EC:3.5.1.-)
Amidohydrolase family protein n=7 Tax=Clostridium difficile RepID=T2W089_CLODI
L2_023_000G1_scaffold_171_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25971..27506)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=T3I3S3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS84766.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
conserved hypothetical protein
L2_023_000G1_scaffold_171_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27529..27963)
DNA (435bp) protein (145aa)
Uncharacterized protein n=160 Tax=Clostridium difficile RepID=C9XM77_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG78330.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_023_000G1_scaffold_171_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28223..29143)
DNA (921bp) protein (307aa)
Uncharacterized protein n=189 Tax=Clostridium difficile RepID=C9XM76_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ67680.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_023_000G1_scaffold_171_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29430..29783
DNA (354bp) protein (118aa)
Uncharacterized protein n=110 Tax=Clostridium difficile RepID=G6BUS9_CLODI
nuclease
Putative nuclease {ECO:0000313|EMBL:CCL20961.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Displaying items 1-30 of 96 in total

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