ggKbase home page

L2_023_000G1_scaffold_174

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_174_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..940
DNA (939bp) protein (313aa)
RNA polymerase sigma factor SigA n=2 Tax=Clostridiales RepID=C5EQF6_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L2_023_000G1_scaffold_174_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1084..1734
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60251.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_023_000G1_scaffold_174_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2025..2291
DNA (267bp) protein (89aa)
Phosphocarrier, HPr family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQF8_9FIRM
Phosphocarrier, HPr family {ECO:0000313|EMBL:EEQ60252.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
PTS system phosphocarrier protein HPr
L2_023_000G1_scaffold_174_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2306..2869)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60255.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_023_000G1_scaffold_174_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3140..7678
DNA (4539bp) protein (1513aa)
Glutamate synthase [NADPH], large subunit {ECO:0000313|EMBL:EEQ60256.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EEQ60256.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
glutamate synthase (ferredoxin) (EC:1.4.7.1)
Glutamate synthase [NADPH], large subunit n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQG2_9FIRM
L2_023_000G1_scaffold_174_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7693..9180
DNA (1488bp) protein (496aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQG3_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EEQ60257.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
glutamate synthase NADH/NADPH small subunit
L2_023_000G1_scaffold_174_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9195..10874)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A3X5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ46711.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
methyl-accepting chemotaxis sensory transducer
L2_023_000G1_scaffold_174_8
unknown

Not on your lists

11175..11333
DNA (159bp) protein (53aa)

This feature has no annotations

L2_023_000G1_scaffold_174_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11273..12271
DNA (999bp) protein (333aa)
Sugar-binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQG5_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EEQ60259.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LacI family transcriptional regulator
L2_023_000G1_scaffold_174_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12513..13604
DNA (1092bp) protein (364aa)
Sugar-binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQG6_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EEQ60260.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LacI family transcriptional regulator
L2_023_000G1_scaffold_174_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13592..15112
DNA (1521bp) protein (507aa)
AlsA ABC superfamily (Atp_bind), allose transport protein (Second module) {ECO:0000313|EMBL:EEQ60261.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EEQ60261.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
AlsA ABC superfamily (Atp_bind), allose transport protein (Second module) n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQG7_9FIRM
ABC transporter
L2_023_000G1_scaffold_174_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15130..16098
DNA (969bp) protein (323aa)
D-allose transport system permease protein AlsC {ECO:0000313|EMBL:EEQ60262.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EEQ60262.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
D-allose transport system permease protein AlsC n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQG8_9FIRM
D-allose transporter subunit
L2_023_000G1_scaffold_174_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16116..16793
DNA (678bp) protein (226aa)
D-allulose-6-phosphate 3-epimerase {ECO:0000313|EMBL:EEQ60263.1}; EC=5.1.3.- {ECO:0000313|EMBL:EEQ60263.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
D-allulose-6-phosphate 3-epimerase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQG9_9FIRM
L2_023_000G1_scaffold_174_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16806..17717
DNA (912bp) protein (304aa)
Putative D-allose kinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH0_9FIRM
Putative D-allose kinase {ECO:0000313|EMBL:EEQ60264.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ROK family protein
L2_023_000G1_scaffold_174_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17822..18910
DNA (1089bp) protein (363aa)
D-allose-binding periplasmic protein {ECO:0000313|EMBL:EEQ60265.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EEQ60265.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
D-allose-binding periplasmic protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH1_9FIRM
periplasmic binding protein/LacI transcriptional regulator
L2_023_000G1_scaffold_174_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18993..19457
DNA (465bp) protein (155aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EEQ60266.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EEQ60266.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Ribose-5-phosphate isomerase B n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH2_9FIRM
ribose 5-phosphate isomerase
L2_023_000G1_scaffold_174_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19435..20394
DNA (960bp) protein (320aa)
ROK family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH3_9FIRM
ROK family protein {ECO:0000313|EMBL:EEQ60267.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transcriptional regulator/sugar kinase
L2_023_000G1_scaffold_174_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20564..20917
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60268.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L2_023_000G1_scaffold_174_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21116..21607
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60269.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_023_000G1_scaffold_174_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21644..22873
DNA (1230bp) protein (410aa)
RNA polymerase sigma factor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH6_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L2_023_000G1_scaffold_174_21
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22888..24651)
DNA (1764bp) protein (588aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ74222.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L2_023_000G1_scaffold_174_22
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24878..25444)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FCE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97871.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L2_023_000G1_scaffold_174_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25737..25976
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EH90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57575.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L2_023_000G1_scaffold_174_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26009..26137
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EH89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57574.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L2_023_000G1_scaffold_174_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26124..26363
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9Z1S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51020.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L2_023_000G1_scaffold_174_26
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26877..27080
DNA (204bp) protein (68aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQX5_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM87982.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Site-specific recombinase XerC
L2_023_000G1_scaffold_174_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27298..29310
DNA (2013bp) protein (671aa)
Hsp90 protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH8_9FIRM
Hsp90 protein {ECO:0000313|EMBL:EEQ60272.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Molecular chaperone, HSP90 family
L2_023_000G1_scaffold_174_28
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29444..30406)
DNA (963bp) protein (321aa)
Sigma-54 interaction domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQH9_9FIRM
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EEQ60273.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transcriptional regulatory protein ZraR
L2_023_000G1_scaffold_174_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30479..31888)
DNA (1410bp) protein (470aa)
Sigma-54 interaction domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQI0_9FIRM
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EEQ60274.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
sigma54 specific transcriptional regulator
L2_023_000G1_scaffold_174_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32405..33556
DNA (1152bp) protein (384aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EEQ60277.1}; EC=1.3.99.- {ECO:0000313|EMBL:EEQ60277.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Acyl-CoA dehydrogenase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQI3_9FIRM
acyl-CoA dehydrogenase
Displaying items 1-30 of 92 in total

View Taxonomy