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L2_023_000G1_scaffold_195

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_195_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1016)
DNA (1014bp) protein (338aa)
Sugar-binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG94_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EDS09682.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
xylF; D-xylose-binding periplasmic protein XylF
L2_023_000G1_scaffold_195_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1107..2114)
DNA (1008bp) protein (336aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG95_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDS09683.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rbsC; ribose transport system permease protein rbsC
L2_023_000G1_scaffold_195_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2117..3619)
DNA (1503bp) protein (501aa)
ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG96_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS09684.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rbsA; ribose ABC transporter ATPase
L2_023_000G1_scaffold_195_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4353..4520)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09686.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_195_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4535..5020)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PG99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09687.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_023_000G1_scaffold_195_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5161..5769)
DNA (609bp) protein (203aa)
Transcriptional regulator, TetR family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGA0_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDS09688.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Transcriptional regulator
L2_023_000G1_scaffold_195_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6507..7532)
DNA (1026bp) protein (342aa)
G5 domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGA4_9FIRM
G5 domain protein {ECO:0000313|EMBL:EDS09692.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_023_000G1_scaffold_195_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7915..8313)
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGA6_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
SSU ribosomal protein S9P
L2_023_000G1_scaffold_195_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8333..8761)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGA7_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
50S ribosomal protein L13
L2_023_000G1_scaffold_195_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9088..9294)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09696.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_195_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9451..9831
DNA (381bp) protein (127aa)
DNA-binding helix-turn-helix protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGA9_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS09697.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_023_000G1_scaffold_195_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10435..11649)
DNA (1215bp) protein (405aa)
putative RNA methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09700.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_195_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11689..12699)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09701.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_195_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12776..14554)
DNA (1779bp) protein (593aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EDS09702.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EDS09702.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
aspS1; Aspartate-tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGB4_9FIRM
L2_023_000G1_scaffold_195_15
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14584..15897)
DNA (1314bp) protein (438aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGB5_9FIRM
L2_023_000G1_scaffold_195_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16325..16729)
DNA (405bp) protein (135aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGB8_9FIRM
L2_023_000G1_scaffold_195_17
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16860..17582)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09707.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
minD; septum site-determining protein MinD
L2_023_000G1_scaffold_195_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17610..19694)
DNA (2085bp) protein (695aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGC0_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EDS09708.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Cell division protein FtsI/penicillin-binding protein 2
L2_023_000G1_scaffold_195_19
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19914..20435)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09709.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rod shape-determining protein MreD.
L2_023_000G1_scaffold_195_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20428..21288)
DNA (861bp) protein (287aa)
Cell shape-determining protein MreC n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGC2_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rod shape-determining protein MreC
L2_023_000G1_scaffold_195_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21366..22424)
DNA (1059bp) protein (353aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGC3_9FIRM
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:EDS09711.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rod shape-determining protein MreB
L2_023_000G1_scaffold_195_22
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22872..23459)
DNA (588bp) protein (196aa)
Maf-like protein maf n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGC6_9FIRM
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
maf protein
L2_023_000G1_scaffold_195_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23425..23724)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09715.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_023_000G1_scaffold_195_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23740..24171)
DNA (432bp) protein (144aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGC8_9FIRM
L2_023_000G1_scaffold_195_25
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24295..26373)
DNA (2079bp) protein (693aa)
Peptidase, U32 family {ECO:0000313|EMBL:EDS09717.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDS09717.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGC9_9FIRM
L2_023_000G1_scaffold_195_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26370..26735)
DNA (366bp) protein (122aa)
Cell division protein ZapA n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGD0_9FIRM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Cell division protein ZapA.
L2_023_000G1_scaffold_195_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27161..29566
DNA (2406bp) protein (802aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGD2_9FIRM
L2_023_000G1_scaffold_195_28
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29799..31661
DNA (1863bp) protein (621aa)
Glycosidases (EC:3.2.1.41)
Alpha amylase, catalytic domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGD3_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EDS09721.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_195_29
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31891..32574
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGD5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS09723.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_023_000G1_scaffold_195_30
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32665..32877
DNA (213bp) protein (71aa)
4Fe-4S binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGD6_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDS09724.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
4Fe-4S ferredoxin
Displaying items 1-30 of 84 in total

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