ggKbase home page

L2_023_000G1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_196_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(132..3071)
DNA (2940bp) protein (980aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96595.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
von willebrand factor, type A domain protein
L2_023_000G1_scaffold_196_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3088..3684)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96594.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
prepilin-type N-cleavage/methylation domain protein
L2_023_000G1_scaffold_196_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3698..5785)
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2B0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96593.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_023_000G1_scaffold_196_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5807..6727)
DNA (921bp) protein (307aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC24_9CLOT
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EEH96592.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_023_000G1_scaffold_196_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6736..8016)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96591.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_023_000G1_scaffold_196_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8018..8566)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6D4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96590.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
fimbrial assembly family protein
L2_023_000G1_scaffold_196_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8579..9775)
DNA (1197bp) protein (399aa)
Type IV pilus assembly protein PilM n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R4_9CLOT
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EEH96589.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
type IV pilus assembly protein PilM
L2_023_000G1_scaffold_196_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10051..10494)
DNA (444bp) protein (148aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFH1_9CLOT
Prepilin peptidase-dependent {ECO:0000313|EMBL:EOR28099.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
type IV pilin
L2_023_000G1_scaffold_196_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10714..11916)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96587.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
tapC; type IV pilus assembly protein TapC
L2_023_000G1_scaffold_196_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11933..13624)
DNA (1692bp) protein (564aa)
General secretory pathway protein E n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH9_9CLOT
General secretory pathway protein E {ECO:0000313|EMBL:EEH96586.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
type IV pilus assembly protein TapB
L2_023_000G1_scaffold_196_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13762..14511)
DNA (750bp) protein (250aa)
hofD; type 4 prepilin-like protein (EC:3.4.23.43 2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96585.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_023_000G1_scaffold_196_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14829..15233)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96584.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_023_000G1_scaffold_196_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15479..17104)
DNA (1626bp) protein (542aa)
Chaperonin n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A5_9CLOT
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
groEL; chaperonin GroEL
L2_023_000G1_scaffold_196_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17119..17403)
DNA (285bp) protein (95aa)
Chaperonin n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC18_9CLOT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
groES; co-chaperonin GroES
L2_023_000G1_scaffold_196_15
unknown

Not on your lists

17485..17898
DNA (414bp) protein (138aa)

This feature has no annotations

L2_023_000G1_scaffold_196_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18197..19687)
DNA (1491bp) protein (497aa)
iron-dependent hydrogenase (EC:1.12.7.2)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96580.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_023_000G1_scaffold_196_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19835..21175)
DNA (1341bp) protein (447aa)
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R2_9CLOT
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit {ECO:0000313|EMBL:EEH96579.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
L2_023_000G1_scaffold_196_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21326..22180)
DNA (855bp) protein (285aa)
Tagatose bisphosphate family class II aldolase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A4_9CLOT
Tagatose bisphosphate family class II aldolase {ECO:0000313|EMBL:EEH96578.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
class II aldolase, tagatose bisphosphate family
L2_023_000G1_scaffold_196_19
unknown

Not on your lists

comp(22250..22378)
DNA (129bp) protein (43aa)

This feature has no annotations

L2_023_000G1_scaffold_196_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22393..23589)
DNA (1197bp) protein (399aa)
AgaS family putative sugar isomerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC14_9CLOT
AgaS family putative sugar isomerase {ECO:0000313|EMBL:EEH96577.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative phosphosugar isomerase
L2_023_000G1_scaffold_196_21
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23620..24351)
DNA (732bp) protein (244aa)
GntR family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGE1_9CLOT
GntR family transcriptional regulator {ECO:0000313|EMBL:EOR28110.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
bacterial regulatory s, gntR family protein
L2_023_000G1_scaffold_196_22
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24515..31363)
DNA (6849bp) protein (2283aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG02433.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_023_000G1_scaffold_196_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31850..32371)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96576.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_023_000G1_scaffold_196_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32371..33510)
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C7_9CLOT
L2_023_000G1_scaffold_196_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33711..34142
DNA (432bp) protein (144aa)
PTS system, mannose/fructose/sorbose family, IIA component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R1_9CLOT
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:EEH96574.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
PTS system mannose-specific component IIAB-like protein
L2_023_000G1_scaffold_196_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34144..34422
DNA (279bp) protein (93aa)
Preprotein translocase, YajC subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A2_9CLOT
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EEH96573.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
preprotein translocase, YajC subunit
L2_023_000G1_scaffold_196_27
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34454..35623)
DNA (1170bp) protein (390aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EL45_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI95417.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
AraC-type DNA-binding domain-containing proteins
L2_023_000G1_scaffold_196_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35997..36473
DNA (477bp) protein (159aa)
PTS system, mannose/fructose/sorbose family, IIB component (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH4_9CLOT
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EEH96571.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_023_000G1_scaffold_196_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36498..37310
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96570.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L2_023_000G1_scaffold_196_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37300..38145
DNA (846bp) protein (282aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R0_9CLOT
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EEH96569.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
PTS system transporter subunit IID
Displaying items 1-30 of 102 in total

View Taxonomy