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L2_023_000G1_scaffold_228

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Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_228_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..531
DNA (531bp) protein (177aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9Z6_9FIRM
L2_023_000G1_scaffold_228_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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613..1131
DNA (519bp) protein (173aa)
superoxide dismutase (Cu-Zn) (EC:1.15.1.1)
Copper/zinc superoxide dismutase n=2 Tax=Clostridiales RepID=B0A9Z5_9FIRM
Superoxide dismutase [Cu-Zn] {ECO:0000313|EMBL:CDA11477.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_023_000G1_scaffold_228_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1302..2276
DNA (975bp) protein (325aa)
UPI0003D5D6B8 related cluster n=1 Tax=unknown RepID=UPI0003D5D6B8
Uncharacterized protein {ECO:0000313|EMBL:ETI95956.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ABC transporter permease
L2_023_000G1_scaffold_228_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2295..4067)
DNA (1773bp) protein (591aa)
Fibronectin-binding protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X9H2_9CLOT
Fibronectin-binding protein {ECO:0000313|EMBL:CDA11475.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
fbpA; fibronectin-binding protein
L2_023_000G1_scaffold_228_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4276..4497
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A9Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11474.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_023_000G1_scaffold_228_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4920..5753
DNA (834bp) protein (278aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
Diaminopimelate epimerase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9Z1_9FIRM
diaminopimelate epimerase
L2_023_000G1_scaffold_228_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5755..6636
DNA (882bp) protein (294aa)
TIGR00255 family protein n=2 Tax=Clostridiales RepID=B0A9Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI95981.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L2_023_000G1_scaffold_228_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6672..7295
DNA (624bp) protein (208aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Guanylate kinase n=2 Tax=Clostridiales RepID=B0A9Y9_9FIRM
gmk; guanylate kinase
L2_023_000G1_scaffold_228_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7297..7572
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=2 Tax=Clostridiales RepID=B0A9Y8_9FIRM
L2_023_000G1_scaffold_228_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7621..8832
DNA (1212bp) protein (404aa)
coaBC; coenzyme A biosynthesis bifunctional phosphopantothenoylcysteine synthetase/decarboxylase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=2 Tax=Clostridiales RepID=B0A9Y7_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CDA11469.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_023_000G1_scaffold_228_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8881..11499
DNA (2619bp) protein (873aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D64E1C related cluster n=1 Tax=unknown RepID=UPI0003D64E1C
priA; primosomal protein N'
L2_023_000G1_scaffold_228_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11526..11999
DNA (474bp) protein (158aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Peptide deformylase n=2 Tax=Clostridiales RepID=B0A9Y5_9FIRM
def2; peptide deformylase 2
L2_023_000G1_scaffold_228_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12027..12941
DNA (915bp) protein (305aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRQ0_9CLOT
fmt; methionyl-tRNA formyltransferase
L2_023_000G1_scaffold_228_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12960..13655
DNA (696bp) protein (232aa)
Putative neutral zinc metallopeptidase n=2 Tax=Clostridiales RepID=R5X9G6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI95974.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
membrane-associated neutral zinc metallopeptidase
L2_023_000G1_scaffold_228_15
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13758..15083
DNA (1326bp) protein (442aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XGB7_9CLOT
rsmB; ribosomal RNA small subunit methyltransferase
L2_023_000G1_scaffold_228_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15093..16124
DNA (1032bp) protein (344aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Probable dual-specificity RNA methyltransferase RlmN n=2 Tax=Clostridiales RepID=B0A9Y1_9FIRM
radical SAM protein
L2_023_000G1_scaffold_228_17
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16142..16894
DNA (753bp) protein (251aa)
Protein phosphatase 2C n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y469_9CLOT
Protein phosphatase 2C {ECO:0000313|EMBL:CDA11462.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
serine/threonine phosphatase
L2_023_000G1_scaffold_228_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16907..18757
DNA (1851bp) protein (617aa)
UPI0003D68E46 related cluster n=1 Tax=unknown RepID=UPI0003D68E46
Uncharacterized protein {ECO:0000313|EMBL:ETI95970.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
serine/threonine-protein kinase and phosphatase
L2_023_000G1_scaffold_228_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18800..19681
DNA (882bp) protein (294aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Clostridiales RepID=B0A9X8_9FIRM
ATP/GTP-binding protein
L2_023_000G1_scaffold_228_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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19684..20340
DNA (657bp) protein (219aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D5996D related cluster n=1 Tax=unknown RepID=UPI0003D5996D
ribulose-phosphate 3-epimerase
L2_023_000G1_scaffold_228_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20352..20999
DNA (648bp) protein (216aa)
UPI0003D5D174 related cluster n=1 Tax=unknown RepID=UPI0003D5D174
Uncharacterized protein {ECO:0000313|EMBL:ETI95967.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
thiamine pyrophosphokinase
L2_023_000G1_scaffold_228_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21049..21447)
DNA (399bp) protein (133aa)
Mutator mutT protein n=2 Tax=Clostridiales RepID=B0A9X5_9FIRM
Mutator mutT protein {ECO:0000313|EMBL:CDA11457.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
mutT_3; 7,8-dihydro-8-oxoguanine-triphosphatase
L2_023_000G1_scaffold_228_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21561..22418
DNA (858bp) protein (286aa)
Phospholipase, patatin family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI95965.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
patatin
L2_023_000G1_scaffold_228_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22486..25089)
DNA (2604bp) protein (868aa)
UPI0003D62D61 related cluster n=1 Tax=unknown RepID=UPI0003D62D61
Uncharacterized protein {ECO:0000313|EMBL:ETI95964.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
phosphoenolpyruvate synthase/pyruvate phosphate dikinase
L2_023_000G1_scaffold_228_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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25838..27142
DNA (1305bp) protein (435aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=3 Tax=Clostridiales RepID=B0A9X1_9FIRM
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EDQ96529.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Na+/H+-dicarboxylate symporters
L2_023_000G1_scaffold_228_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27502..27690)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=2 Tax=Clostridiales RepID=B0A9X0_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rpmB; 50S ribosomal protein L28
L2_023_000G1_scaffold_228_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28343..28693
DNA (351bp) protein (117aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0AAY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11452.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_023_000G1_scaffold_228_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28709..30346
DNA (1638bp) protein (546aa)
DAK2 domain fusion protein YloV n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAY8_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EDQ96526.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
phosphatase
L2_023_000G1_scaffold_228_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30473..32533
DNA (2061bp) protein (687aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDQ96525.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDQ96525.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ATP-dependent DNA helicase RecG n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAY7_9FIRM
ATP-dependent DNA helicase RecG
L2_023_000G1_scaffold_228_30
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32577..33134
DNA (558bp) protein (186aa)
UPI0003D5CA03 related cluster n=1 Tax=unknown RepID=UPI0003D5CA03
Uncharacterized protein {ECO:0000313|EMBL:ETI95705.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
Displaying items 1-30 of 84 in total

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