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L2_023_000G1_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_239_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..183
DNA (183bp) protein (61aa)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6APG0_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL09077.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_239_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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180..1049
DNA (870bp) protein (290aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Roseburia intestinalis RepID=D4KQC6_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
ABC transporter, permease protein {ECO:0000313|EMBL:EEU99409.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_239_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1250..2020
DNA (771bp) protein (257aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFJ6_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEU99408.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Short-chain dehydrogenases of various substrate specificities
L2_023_000G1_scaffold_239_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2285..2644
DNA (360bp) protein (120aa)
Transcriptional regulator, ArsR family n=2 Tax=Roseburia RepID=C7GFJ5_9FIRM
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CDA57783.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ArsR family transcriptional regulator
L2_023_000G1_scaffold_239_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2689..2907
DNA (219bp) protein (73aa)
Cation transport ATPase n=4 Tax=Roseburia RepID=D4KW33_9FIRM
Cation transport ATPase
Cation transport ATPase {ECO:0000313|EMBL:CDA57782.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_239_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3143..5026
DNA (1884bp) protein (628aa)
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase n=4 Tax=Roseburia RepID=D4KW34_9FIRM
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase {ECO:0000313|EMBL:CBL11574.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_239_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5227..5550
DNA (324bp) protein (108aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GCS8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57780.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_239_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5492..7756
DNA (2265bp) protein (755aa)
Heavy metal translocating P-type ATPase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B0P8_9FIRM
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CDA57778.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L2_023_000G1_scaffold_239_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7845..7961
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQD2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09084.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_239_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7996..9138
DNA (1143bp) protein (381aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GCT0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11578.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_239_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9135..10070)
DNA (936bp) protein (312aa)
Diguanylate cyclase (GGDEF) domain n=2 Tax=Roseburia intestinalis RepID=D4KW39_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBL11579.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_239_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10067..11191)
DNA (1125bp) protein (375aa)
Putative GGDEF domain protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B3X1_9FIRM
Putative GGDEF domain protein {ECO:0000313|EMBL:CDA57775.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
diguanylate cyclase (GGDEF) domain
L2_023_000G1_scaffold_239_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11429..12877
DNA (1449bp) protein (483aa)
Iron only hydrogenase large subunit, C-terminal domain (EC:1.12.7.2)
Iron only hydrogenase large subunit, C-terminal domain {ECO:0000313|EMBL:CBL09088.1}; EC=1.12.7.2 {ECO:0000313|EMBL:CBL09088.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Iron only hydrogenase large subunit, C-terminal domain n=2 Tax=Roseburia intestinalis RepID=D4KQD6_9FIRM
L2_023_000G1_scaffold_239_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13136..13918
DNA (783bp) protein (261aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KW41_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBL11581.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_239_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13940..15085
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQD8_9FIRM
Protein of unknown function (DUF2974).
Uncharacterized protein {ECO:0000313|EMBL:CBL09090.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_239_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15313..15597
DNA (285bp) protein (95aa)
10 kDa chaperonin n=4 Tax=Roseburia RepID=D4KQD9_9FIRM
Co-chaperonin GroES (HSP10)
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_239_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15642..17264
DNA (1623bp) protein (541aa)
60 kDa chaperonin n=3 Tax=Roseburia RepID=D4KQE0_9FIRM
chaperonin GroL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_239_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17459..18547)
DNA (1089bp) protein (363aa)
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (EC:2.6.1.9)
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase {ECO:0000313|EMBL:CBL11585.1}; EC=2.6.1.9 {ECO:0000313|EMBL:CBL11585.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase n=2 Tax=Roseburia intestinalis RepID=D4KW45_9FIRM
L2_023_000G1_scaffold_239_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18636..22181
DNA (3546bp) protein (1182aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B0P0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57768.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_023_000G1_scaffold_239_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22197..23444
DNA (1248bp) protein (416aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6BX53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57767.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_023_000G1_scaffold_239_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23469..24278
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KQE2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11588.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_239_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24279..25445
DNA (1167bp) protein (389aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7GCU6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09095.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_239_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25630..26238)
DNA (609bp) protein (203aa)
Mn-containing catalase n=3 Tax=Roseburia RepID=D4KQE4_9FIRM
Mn-containing catalase
Mn-containing catalase {ECO:0000313|EMBL:CBL09096.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_239_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26238..26504)
DNA (267bp) protein (89aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GBY4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57763.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_239_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26501..26794)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KQE6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09098.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_239_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26889..26999
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BX47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57762.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_023_000G1_scaffold_239_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27002..28318
DNA (1317bp) protein (439aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQE8_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL09100.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_239_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28341..30074
DNA (1734bp) protein (578aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQE9_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBL09101.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Methyl-accepting chemotaxis protein
L2_023_000G1_scaffold_239_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30263..31714
DNA (1452bp) protein (484aa)
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Glutamate--tRNA ligase n=4 Tax=Roseburia RepID=D4KQF0_9FIRM
L2_023_000G1_scaffold_239_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31783..33624
DNA (1842bp) protein (614aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B0N2_9FIRM
Displaying items 1-30 of 81 in total

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