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L2_023_000G1_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_250_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(76..1380)
DNA (1305bp) protein (435aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6R1_CLOSW
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADL03567.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_023_000G1_scaffold_250_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(1498..3021)
DNA (1524bp) protein (508aa)
Two component transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RUV9_9FIRM
Two component transcriptional regulator AraC family {ECO:0000313|EMBL:CDC46811.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
AraC family transcriptional regulator
L2_023_000G1_scaffold_250_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(3026..4846)
DNA (1821bp) protein (607aa)
Signal transduction histidine kinase LytS n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RG61_9FIRM
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:CDC46810.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
signal transduction histidine kinase LytS
L2_023_000G1_scaffold_250_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(4843..6126)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RN92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46809.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
msmE1; multiple sugar-binding protein
L2_023_000G1_scaffold_250_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6164..7861)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PW00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22641.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L2_023_000G1_scaffold_250_6
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8028..8717)
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=3 Tax=Lachnospiraceae RepID=C9L9G5_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG83941.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_023_000G1_scaffold_250_7
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8710..10206)
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Lachnospiraceae RepID=C9L9G4_BLAHA
Signal transduction histidine kinase
L2_023_000G1_scaffold_250_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

10399..11781
DNA (1383bp) protein (461aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6PLZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45566.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATPase
L2_023_000G1_scaffold_250_9
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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11905..12138
DNA (234bp) protein (78aa)
DNA-binding helix-turn-helix protein n=3 Tax=Lachnospiraceae RepID=C9L9G1_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC10783.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Predicted transcriptional regulators
L2_023_000G1_scaffold_250_10
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(12220..13182)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VKD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92676.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L2_023_000G1_scaffold_250_11
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13455..14357)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000371E7CC
Uncharacterized protein {ECO:0000313|EMBL:EGG83909.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Protein of unknown function (DUF2899).
L2_023_000G1_scaffold_250_12
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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14648..15859
DNA (1212bp) protein (404aa)
Transcriptional regulator, AraC family n=3 Tax=Anaerostipes RepID=B0MAP7_9FIRM
AraC family bacterial regulatory protein {ECO:0000313|EMBL:EFV21237.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
hypothetical protein
L2_023_000G1_scaffold_250_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15937..19824)
DNA (3888bp) protein (1296aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GMU1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93909.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
cell wall surface protein
L2_023_000G1_scaffold_250_14
unknown

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comp(19858..19971)
DNA (114bp) protein (38aa)

This feature has no annotations

L2_023_000G1_scaffold_250_15
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20219..21097)
DNA (879bp) protein (293aa)
Transcriptional regulator, MerR family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBI9_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EET61792.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Predicted transcriptional regulators
L2_023_000G1_scaffold_250_16
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21319..21855)
DNA (537bp) protein (179aa)
Rubrerythrin n=2 Tax=Clostridiales RepID=B0NGS0_CLOSV
Rubrerythrin {ECO:0000313|EMBL:EDS06280.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
rubrerythrin
L2_023_000G1_scaffold_250_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(21965..23197)
DNA (1233bp) protein (411aa)
ABC transporter (Substrate-binding protein) n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SBS8_9FIRM
ABC transporter (Substrate-binding protein) {ECO:0000313|EMBL:CDC44042.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC transporter substrate-binding protein
L2_023_000G1_scaffold_250_18
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23210..24322)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EAH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD99306.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L2_023_000G1_scaffold_250_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(24353..25207)
DNA (855bp) protein (285aa)
ABC transporter permease n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RFH4_9FIRM
ABC transporter permease {ECO:0000313|EMBL:CDC44044.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type sugar transport system, permease component
L2_023_000G1_scaffold_250_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(25221..26099)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R869_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44045.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_023_000G1_scaffold_250_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(26127..27398)
DNA (1272bp) protein (424aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RM14_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC44046.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_023_000G1_scaffold_250_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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27577..29391
DNA (1815bp) protein (605aa)
Two-component sensor kinase YesM n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SBT2_9FIRM
Two-component sensor kinase YesM {ECO:0000313|EMBL:CDC44047.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
two-component sensor kinase YesM
L2_023_000G1_scaffold_250_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

29369..30988
DNA (1620bp) protein (540aa)
Two component transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R542_9FIRM
Two component transcriptional regulator AraC family {ECO:0000313|EMBL:CDC44048.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
CheY-like receiver domain protein
L2_023_000G1_scaffold_250_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(31102..32118)
DNA (1017bp) protein (339aa)
Exonuclease family protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RE17_9FIRM
Exonuclease family protein {ECO:0000313|EMBL:CDC43524.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Inhibitor of the KinA pathway to sporulation, predicted exonuclease
L2_023_000G1_scaffold_250_25
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32263..34101)
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NAQ2_9FIRM
L2_023_000G1_scaffold_250_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34105..35463)
DNA (1359bp) protein (453aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKC4_9FIRM
L2_023_000G1_scaffold_250_27
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

35651..36832
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47925.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L2_023_000G1_scaffold_250_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(36757..37785)
DNA (1029bp) protein (343aa)
Alpha/beta hydrolase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RN17_9FIRM
Alpha/beta hydrolase {ECO:0000313|EMBL:CDC44441.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
alpha/beta hydrolase
L2_023_000G1_scaffold_250_29
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37817..40081)
DNA (2265bp) protein (755aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
malP; maltodextrin phosphorylase MalP (EC:2.4.1.1)
Phosphorylase n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AGW3_9FIRM
L2_023_000G1_scaffold_250_30
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(40101..41171)
DNA (1071bp) protein (357aa)
Sugar-binding domain protein n=3 Tax=Lachnospiraceae RepID=C9LCB5_BLAHA
Sugar-binding domain protein {ECO:0000313|EMBL:EEX20339.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
LacI family transcriptional regulator
Displaying items 1-30 of 64 in total

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