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L2_023_000G1_scaffold_257

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_257_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(198..920)
DNA (723bp) protein (241aa)
Polar amino acid transport system ATP-binding protein (EC:3.6.3.21)
ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDW6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS10155.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_257_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(907..1572)
DNA (666bp) protein (222aa)
ABC transporter, permease protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDW7_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDS10156.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
polar amino acid ABC transporter inner membrane subunit
L2_023_000G1_scaffold_257_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1642..2508)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10158.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ABC transporter substrate-binding protein
L2_023_000G1_scaffold_257_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2666..3553)
DNA (888bp) protein (296aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase, RluA family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDX0_9FIRM
L2_023_000G1_scaffold_257_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3623..3826)
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDX1_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
50S ribosomal protein L31
L2_023_000G1_scaffold_257_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3948..4289)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10161.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_023_000G1_scaffold_257_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4805..6514)
DNA (1710bp) protein (570aa)
Phosphomannomutase (EC:5.4.2.8 5.4.2.2)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDX4_9FIRM
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EDS10163.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_257_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6757..7332
DNA (576bp) protein (192aa)
Putative manganese efflux pump MntP n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDX5_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_023_000G1_scaffold_257_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7510..9039
DNA (1530bp) protein (510aa)
Mg chelatase-like protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDX6_9FIRM
Mg chelatase-like protein {ECO:0000313|EMBL:EDS10165.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
yifB; putative protein YifB
L2_023_000G1_scaffold_257_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9271..10431
DNA (1161bp) protein (387aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EDS10166.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EDS10166.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
prs; ribose-phosphate diphosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDX7_9FIRM
L2_023_000G1_scaffold_257_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10911..12266
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDY0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDS10169.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
multi antimicrobial extrusion protein MatE
L2_023_000G1_scaffold_257_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12314..13420)
DNA (1107bp) protein (369aa)
4Fe-4S binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDY1_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDS10171.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
uncharacterized Fe-S center protein
L2_023_000G1_scaffold_257_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13862..15163
DNA (1302bp) protein (434aa)
Transporter, CPA2 family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDY3_9FIRM
Transporter, CPA2 family {ECO:0000313|EMBL:EDS10172.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
sodium/hydrogen exchanger family protein
L2_023_000G1_scaffold_257_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15269..15451
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10173.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_257_15
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16449..17369)
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
rluA; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDY9_9FIRM
L2_023_000G1_scaffold_257_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17362..17859)
DNA (498bp) protein (166aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDZ0_9FIRM
L2_023_000G1_scaffold_257_17
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17933..20737)
DNA (2805bp) protein (935aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ileS; Isoleucine-tRNA ligase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDZ1_9FIRM
L2_023_000G1_scaffold_257_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20805..21632)
DNA (828bp) protein (276aa)
DivIVA domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDZ2_9FIRM
DivIVA domain protein {ECO:0000313|EMBL:EDS10181.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
DivIVA domain
L2_023_000G1_scaffold_257_19
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21682..22443)
DNA (762bp) protein (254aa)
S4 domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDZ3_9FIRM
S4 domain protein {ECO:0000313|EMBL:EDS10182.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_023_000G1_scaffold_257_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22443..22889)
DNA (447bp) protein (149aa)
Cell division protein SepF n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDZ4_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_023_000G1_scaffold_257_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22909..23637)
DNA (729bp) protein (243aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDZ5_9FIRM
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EDS10184.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
UPF0001 protein
L2_023_000G1_scaffold_257_22
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23615..24850)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10185.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_023_000G1_scaffold_257_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24860..25105)
DNA (246bp) protein (82aa)
RNA-binding protein Hfq n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDZ7_9FIRM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
RNA-binding protein Hfq
L2_023_000G1_scaffold_257_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25194..26147)
DNA (954bp) protein (318aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
miaA; tRNA dimethylallyltransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDZ8_9FIRM
L2_023_000G1_scaffold_257_25
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26151..28226)
DNA (2076bp) protein (692aa)
DNA mismatch repair protein MutL n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDZ9_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
DNA mismatch repair protein MutL
L2_023_000G1_scaffold_257_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28247..30862)
DNA (2616bp) protein (872aa)
DNA mismatch repair protein MutS n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PE00_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
DNA mismatch repair protein MutS
L2_023_000G1_scaffold_257_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30935..31339)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PE01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10190.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Protein of unknown function (DUF964).
L2_023_000G1_scaffold_257_28
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31390..32802)
DNA (1413bp) protein (471aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC:2.-.-.-)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PE02_9FIRM
L2_023_000G1_scaffold_257_29
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33171..33848
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PE04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10193.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_023_000G1_scaffold_257_30
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33921..35123)
DNA (1203bp) protein (401aa)
Metallo-beta-lactamase domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PE05_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDS10194.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
flavodoxin/nitric oxide synthase
Displaying items 1-30 of 70 in total

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