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L2_023_000G1_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_262_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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213..476
DNA (264bp) protein (88aa)
Sporulation protein, YlmC/YmxH family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D308_9CLOT
Sporulation protein, YlmC/YmxH family {ECO:0000313|EMBL:EEG54288.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
YlmC/YmxH family sporulation protein
L2_023_000G1_scaffold_262_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(734..1492)
DNA (759bp) protein (253aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
aroD; 3-dehydroquinate dehydratase AroD (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIF7_9CLOT
L2_023_000G1_scaffold_262_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1858..2310
DNA (453bp) protein (151aa)
Transcriptional repressor NrdR n=1 Tax=Clostridium sp. CAG:7 RepID=R5INH9_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP-cone domain-containing protein
L2_023_000G1_scaffold_262_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2329..2850
DNA (522bp) protein (174aa)
HAD superfamily (Subfamily IIIA) phosphatase TIGR01668 n=1 Tax=Clostridium sp. CAG:7 RepID=R5II59_9CLOT
HAD superfamily (Subfamily IIIA) phosphatase TIGR01668 {ECO:0000313|EMBL:CCY41853.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
L2_023_000G1_scaffold_262_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2967..3524
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYN5_9CLOT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
translation elongation factor P (EF-P)
L2_023_000G1_scaffold_262_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3652..5439
DNA (1788bp) protein (596aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIF0_9CLOT
L2_023_000G1_scaffold_262_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5467..8643
DNA (3177bp) protein (1059aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41849.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
SNF2-like protein
L2_023_000G1_scaffold_262_8
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8667..9293
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKX6_9CLOT
Iron-sulfur flavoprotein {ECO:0000313|EMBL:KJJ68994.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
NADPH-dependent FMN reductase
L2_023_000G1_scaffold_262_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9697..11022
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II49_9CLOT
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RnfABCDGE type electron transport complex subunit C
L2_023_000G1_scaffold_262_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11038..11979
DNA (942bp) protein (314aa)
Electron transport complex RnfABCDGE type D subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYM4_9CLOT
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
electron transport complex, RnfABCDGE type, D subunit
L2_023_000G1_scaffold_262_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11976..12584
DNA (609bp) protein (203aa)
Predicted NADH:ubiquinone oxidoreductase subunit RnfG n=1 Tax=Clostridium sp. CAG:7 RepID=R5ING2_9CLOT
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
L2_023_000G1_scaffold_262_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12597..13271
DNA (675bp) protein (225aa)
Electron transport complex RnfABCDGE type E subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYN1_9CLOT
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
electron transport complex, RnfABCDGE type, E subunit
L2_023_000G1_scaffold_262_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13285..13860
DNA (576bp) protein (192aa)
Electron transport complex RnfABCDGE type A subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IID5_9CLOT
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
electron transport complex, RnfABCDGE type, A subunit
L2_023_000G1_scaffold_262_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13876..14676
DNA (801bp) protein (267aa)
Electron transport complex RnfABCDGE type B subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5INF7_9CLOT
Electron transport complex RnfABCDGE type B subunit {ECO:0000313|EMBL:CCY41834.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
electron transport complex, RnfABCDGE type, B subunit
L2_023_000G1_scaffold_262_15
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14761..15294
DNA (534bp) protein (178aa)
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109, ECO:0000313|EMBL:CBL23099.1}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109, ECO:0000313|EMBL:CBL23099.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Shikimate kinase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LQP1_9FIRM
L2_023_000G1_scaffold_262_16
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15314..16195
DNA (882bp) protein (294aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Blautia sp. CAG:257 RepID=R5X9H3_9FIRM
L2_023_000G1_scaffold_262_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16704..17546
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42743.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cell wall hydrolase SleB
L2_023_000G1_scaffold_262_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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17683..18147
DNA (465bp) protein (155aa)
YhcH/YjgK/YiaL family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETQ0_9FIRM
YhcH/YjgK/YiaL family protein {ECO:0000313|EMBL:EEQ61394.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_023_000G1_scaffold_262_19
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18456..20060
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Roseburia sp. CAG:50 RepID=R5TEF4_9FIRM
L2_023_000G1_scaffold_262_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20257..20682
DNA (426bp) protein (142aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D1S2_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEG54721.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
transcriptional regulator, GntR family
L2_023_000G1_scaffold_262_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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20648..21547
DNA (900bp) protein (300aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETQ7_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ61401.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC transporter
L2_023_000G1_scaffold_262_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21522..24080
DNA (2559bp) protein (853aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9Z1W9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ33926.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L2_023_000G1_scaffold_262_23
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24277..25473
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HL03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97898.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
class I and II aminotransferase
L2_023_000G1_scaffold_262_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25476..26537
DNA (1062bp) protein (354aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Histidinol-phosphate aminotransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1E8_9CLOT
class I and II aminotransferase
L2_023_000G1_scaffold_262_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26574..27737
DNA (1164bp) protein (388aa)
Sporulation integral membrane protein YtvI n=10 Tax=Clostridium RepID=G5HVY1_9CLOT
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:ENZ18977.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
sporulation integral membrane protein YtvI
L2_023_000G1_scaffold_262_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27770..29128
DNA (1359bp) protein (453aa)
MATE efflux family protein n=4 Tax=Clostridium RepID=N9X764_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENZ11156.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
putative efflux protein, MATE family
L2_023_000G1_scaffold_262_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29180..31069
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J154_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42761.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ErfK/YbiS/YcfS/YnhG family protein
L2_023_000G1_scaffold_262_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31281..31685
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1F3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42762.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
h16_A3178; histone H1-like protein (alanine/lysin-rich protein)
L2_023_000G1_scaffold_262_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31802..33295
DNA (1494bp) protein (498aa)
Fmu (Sun) domain-containing protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IR68_9CLOT
Fmu (Sun) domain-containing protein {ECO:0000313|EMBL:CCY42764.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tRNA and rRNA cytosine-C5-methylases
L2_023_000G1_scaffold_262_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33268..34185)
DNA (918bp) protein (306aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1F9_9CLOT
RluA family pseudouridine synthase
Displaying items 1-30 of 64 in total

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