ggKbase home page

L2_023_000G1_scaffold_263

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_263_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)
Chromosome partitioning protein n=2 Tax=Clostridiales RepID=F4XFN1_9FIRM
ATPases involved in chromosome partitioning
Uncharacterized protein {ECO:0000313|EMBL:EHE98633.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L2_023_000G1_scaffold_263_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

588..2414
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47318.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_023_000G1_scaffold_263_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2578..4029
DNA (1452bp) protein (484aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL65_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN47317.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_023_000G1_scaffold_263_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4040..5005
DNA (966bp) protein (322aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL64_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN47316.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_023_000G1_scaffold_263_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5094..6890
DNA (1797bp) protein (599aa)
Multiple sugar transport system substrate-binding protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL63_9FIRM
Multiple sugar transport system substrate-binding protein {ECO:0000313|EMBL:EGN47315.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_023_000G1_scaffold_263_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6999..9887
DNA (2889bp) protein (963aa)
exo-1,4-beta-glucosidase (EC:3.2.1.74 3.2.1.21)
Beta-glucosidase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL62_9FIRM
Beta-glucosidase {ECO:0000313|EMBL:EGN47314.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L2_023_000G1_scaffold_263_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9897..11489)
DNA (1593bp) protein (531aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BL21_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:ERI72930.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_023_000G1_scaffold_263_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11642..13381
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47312.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
extracellular solute-binding protein family 1 protein
L2_023_000G1_scaffold_263_9
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13607..15013
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KCF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44155.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L2_023_000G1_scaffold_263_10
unknown

Not on your lists

15024..15593
DNA (570bp) protein (190aa)

This feature has no annotations

L2_023_000G1_scaffold_263_11
unknown

Not on your lists

15654..15842
DNA (189bp) protein (63aa)

This feature has no annotations

L2_023_000G1_scaffold_263_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15983..16552)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47309.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L2_023_000G1_scaffold_263_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16705..17916)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47308.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Alcohol dehydrogenase, class IV
L2_023_000G1_scaffold_263_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18140..19702
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47307.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
two component AraC family transcriptional regulator
L2_023_000G1_scaffold_263_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20122..21063
DNA (942bp) protein (314aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL54_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN47306.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
polysaccharide ABC transporter permease
L2_023_000G1_scaffold_263_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21077..21988
DNA (912bp) protein (304aa)
Multiple sugar transport system permease n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL53_9FIRM
Multiple sugar transport system permease {ECO:0000313|EMBL:EGN47305.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sugar ABC transporter permease
L2_023_000G1_scaffold_263_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21988..23730
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47304.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
putative sugar ABC transporter substrate-binding protein
L2_023_000G1_scaffold_263_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23795..25843
DNA (2049bp) protein (683aa)
Alpha-D-xyloside xylohydrolase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL51_9FIRM
Alpha-D-xyloside xylohydrolase {ECO:0000313|EMBL:EGN47303.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycoside hydrolase
L2_023_000G1_scaffold_263_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25999..27771
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47302.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
integral membrane sensor signal transduction histidine kinase
L2_023_000G1_scaffold_263_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28039..29721
DNA (1683bp) protein (561aa)
M3 family oligoendopeptidase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL49_9FIRM
M3 family oligoendopeptidase {ECO:0000313|EMBL:EGN47301.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
oligoendopeptidase, M3 family
L2_023_000G1_scaffold_263_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29728..30681
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47300.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
exonuclease
L2_023_000G1_scaffold_263_22
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30736..32205)
DNA (1470bp) protein (490aa)
dacA3; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47294.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L2_023_000G1_scaffold_263_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32556..33305
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47293.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_023_000G1_scaffold_263_24
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33308..33640
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2UVV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE90938.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
Domain of unknown function (DUF1814).
L2_023_000G1_scaffold_263_25
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33659..34348
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2UVV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERL22325.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
Domain of unknown function (DUF1814).
L2_023_000G1_scaffold_263_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34535..37456)
DNA (2922bp) protein (974aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47292.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycoside hydrolase family 3
L2_023_000G1_scaffold_263_27
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37757..38125
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47291.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Predicted transcriptional regulators
L2_023_000G1_scaffold_263_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38122..38760
DNA (639bp) protein (213aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
trmB; tRNA (guanine-N1)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL38_9FIRM
L2_023_000G1_scaffold_263_29
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38818..39936
DNA (1119bp) protein (373aa)
Transposase IS605 n=1 Tax=Geobacillus sp. JF8 RepID=S5Z0G4_9BACI
Transposase {ECO:0000313|EMBL:KEZ85425.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
transposase IS605
L2_023_000G1_scaffold_263_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40210..40530
DNA (321bp) protein (107aa)
Thioredoxin n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL31_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
thioredoxin
Displaying items 1-30 of 64 in total

View Taxonomy