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L2_023_000G1_scaffold_269

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_269_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..328
DNA (327bp) protein (109aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1A0_9FIRM
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBL13390.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_269_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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506..1003
DNA (498bp) protein (166aa)
Topoisomerase IA n=2 Tax=Roseburia intestinalis RepID=D4L1A1_9FIRM
Topoisomerase IA
Topoisomerase IA {ECO:0000313|EMBL:CBL13391.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_269_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1457..2050
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7G935_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10159.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_269_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2079..2741
DNA (663bp) protein (221aa)
Response regulator receiver domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G937_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEV01688.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_023_000G1_scaffold_269_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2731..3555
DNA (825bp) protein (275aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Histidine kinase A domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G938_9FIRM
signal transduction histidine kinase
L2_023_000G1_scaffold_269_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3680..4360
DNA (681bp) protein (227aa)
ABC-type antimicrobial peptide transport system, ATPase component n=3 Tax=Clostridiales RepID=D4J4E8_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK92577.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_023_000G1_scaffold_269_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4360..6348
DNA (1989bp) protein (663aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTG0_9FIRM
ABC-type transport system, involved in lipoprotein release, permease component
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:CBL10162.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_269_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6423..6752
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KTG1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10163.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_269_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7542..7673)
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7G943_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10165.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_269_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7915..9633
DNA (1719bp) protein (573aa)
Methyl-accepting chemotaxis protein n=2 Tax=Roseburia intestinalis RepID=D4KTG4_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBL10166.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Methyl-accepting chemotaxis protein
L2_023_000G1_scaffold_269_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9680..11371
DNA (1692bp) protein (564aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G946_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEV01653.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
two-component system, PleD related family, response regulator
L2_023_000G1_scaffold_269_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11423..11935)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KTG5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13401.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_269_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12233..13951
DNA (1719bp) protein (573aa)
Glycosidases (EC:3.2.1.135)
Alpha amylase, catalytic domain protein n=2 Tax=Roseburia RepID=C7G948_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEV01655.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_269_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14061..15416
DNA (1356bp) protein (452aa)
MATE efflux family protein n=3 Tax=Roseburia RepID=C7G949_9FIRM
putative efflux protein, MATE family
MATE efflux family protein {ECO:0000313|EMBL:EEV01656.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_269_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15471..16361)
DNA (891bp) protein (297aa)
Transcriptional regulator n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTG8_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDA54018.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Transcriptional regulator
L2_023_000G1_scaffold_269_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16546..17817
DNA (1272bp) protein (424aa)
Di-and tricarboxylate transporters n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTG9_9FIRM
Di-and tricarboxylate transporters
Di-and tricarboxylate transporters {ECO:0000313|EMBL:CBL10171.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_269_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17882..18754
DNA (873bp) protein (291aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.32)
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region {ECO:0000313|EMBL:CBL10172.1}; EC=4.2.1.32 {ECO:0000313|EMBL:CBL10172.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region n=2 Tax=Roseburia intestinalis RepID=D4KTH0_9FIRM
L2_023_000G1_scaffold_269_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18776..19405
DNA (630bp) protein (210aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.32)
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region {ECO:0000313|EMBL:CBL10173.1}; EC=4.2.1.32 {ECO:0000313|EMBL:CBL10173.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region n=4 Tax=Roseburia RepID=D4KTH1_9FIRM
L2_023_000G1_scaffold_269_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19630..20064
DNA (435bp) protein (145aa)
Transcriptional regulators n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTH2_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL10174.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_269_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20061..20741
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7G957_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10175.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_269_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21141..22541
DNA (1401bp) protein (467aa)
MATE efflux family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G960_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEV01609.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
putative efflux protein, MATE family
L2_023_000G1_scaffold_269_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22651..24213
DNA (1563bp) protein (521aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL10178.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
hypothetical protein
L2_023_000G1_scaffold_269_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24312..25532)
DNA (1221bp) protein (407aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BA10_9FIRM
L2_023_000G1_scaffold_269_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25970..26608)
DNA (639bp) protein (213aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057, ECO:0000313|EMBL:CBL10180.1};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
tRNA (guanine-N(7)-)-methyltransferase n=3 Tax=Roseburia intestinalis RepID=D4KTH8_9FIRM
L2_023_000G1_scaffold_269_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26858..28264
DNA (1407bp) protein (469aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBL10181.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBL10181.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTH9_9FIRM
L2_023_000G1_scaffold_269_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28492..29151
DNA (660bp) protein (220aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G967_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA56134.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_269_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29152..30027
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7G968_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10183.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_269_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30052..30657)
DNA (606bp) protein (202aa)
Putative molybdopterin-guanine dinucleotide biosynthesis protein A n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G969_9FIRM
Putative molybdopterin-guanine dinucleotide biosynthesis protein A {ECO:0000313|EMBL:EEV01618.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Molybdopterin-guanine dinucleotide biosynthesis protein A
L2_023_000G1_scaffold_269_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30764..32272
DNA (1509bp) protein (503aa)
Arginine/lysine/ornithine decarboxylases (EC:4.1.1.18)
Arginine/lysine/ornithine decarboxylases {ECO:0000313|EMBL:CBL13422.1}; EC=4.1.1.18 {ECO:0000313|EMBL:CBL13422.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Arginine/lysine/ornithine decarboxylases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1D2_9FIRM
L2_023_000G1_scaffold_269_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32303..32890
DNA (588bp) protein (196aa)
Guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AW82_9FIRM
Guanylate kinase {ECO:0000313|EMBL:CDA56138.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying items 1-30 of 81 in total

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