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L2_023_000G1_scaffold_284

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Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_284_1

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391..714
DNA (324bp) protein (108aa)
DNA-binding helix-turn-helix protein n=3 Tax=root RepID=C0FXS4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:EKC51314.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_023_000G1_scaffold_284_2
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1367..1789
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=D4KT32_9FIRM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56020.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
L2_023_000G1_scaffold_284_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1798..2118
DNA (321bp) protein (107aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=C0FXR1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98335.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_023_000G1_scaffold_284_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2108..2275
DNA (168bp) protein (56aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=D4RZQ6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93615.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_023_000G1_scaffold_284_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2244..2654
DNA (411bp) protein (137aa)
Toxin-antitoxin system, toxin component, MazF family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GI22_9FIRM
Toxin-antitoxin system, toxin component, MazF family {ECO:0000313|EMBL:EEU98541.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Growth inhibitor
L2_023_000G1_scaffold_284_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2732..2980
DNA (249bp) protein (83aa)
Uncharacterized protein n=8 Tax=Clostridiales RepID=C0FXR3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98332.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_023_000G1_scaffold_284_7
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3140..4801
DNA (1662bp) protein (554aa)
Site-specific recombinases, DNA invertase Pin homologs n=4 Tax=Clostridiales RepID=D4KT37_9FIRM
Site-specific recombinase {ECO:0000313|EMBL:AEN98331.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Site-specific recombinases, DNA invertase Pin homologs
L2_023_000G1_scaffold_284_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4802..6445
DNA (1644bp) protein (548aa)
Site-specific recombinases, DNA invertase Pin homologs n=4 Tax=Clostridiales RepID=D4JJ14_9FIRM
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBK93611.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_023_000G1_scaffold_284_9
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6445..8025
DNA (1581bp) protein (527aa)
Site-specific recombinases, DNA invertase Pin homologs n=5 Tax=Clostridiales RepID=D4JJ13_9FIRM
Recombinase {ECO:0000313|EMBL:AEN98329.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Site-specific recombinases, DNA invertase Pin homologs
L2_023_000G1_scaffold_284_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8257..8829
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQ49_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09001.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_284_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8936..10219
DNA (1284bp) protein (428aa)
Erythromycin esterase homolog n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KQ50_9FIRM
Erythromycin esterase homolog
Erythromycin esterase homolog {ECO:0000313|EMBL:CBL09002.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_284_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10261..10626
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B819_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57014.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_023_000G1_scaffold_284_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10776..11975
DNA (1200bp) protein (400aa)
Exonuclease SbcD n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVW1_9FIRM
exonuclease SbcD
Exonuclease SbcD {ECO:0000313|EMBL:CBL11501.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_284_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12086..15958
DNA (3873bp) protein (1291aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL11502.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
hypothetical protein
L2_023_000G1_scaffold_284_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16135..17508
DNA (1374bp) protein (458aa)
pyridoxal-phosphate dependent TrpB-like enzyme (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CBL11503.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Tryptophan synthase beta chain n=4 Tax=Roseburia RepID=D4KQ55_9FIRM
L2_023_000G1_scaffold_284_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17879..18379
DNA (501bp) protein (167aa)
Transcriptional regulators n=3 Tax=Roseburia RepID=D4KQ56_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CDA57019.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_284_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18360..20201
DNA (1842bp) protein (614aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B1G6_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDA57020.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type multidrug transport system, ATPase and permease components
L2_023_000G1_scaffold_284_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20201..21874
DNA (1674bp) protein (558aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BD72_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDA57021.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type multidrug transport system, ATPase and permease components
L2_023_000G1_scaffold_284_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22151..22588
DNA (438bp) protein (146aa)
Transcriptional regulator, MarR family n=4 Tax=Roseburia RepID=D4KQ60_9FIRM
transcriptional regulator, MarR family
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDA57022.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_284_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22590..23354
DNA (765bp) protein (255aa)
Predicted permeases n=4 Tax=Roseburia RepID=D4KQ61_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBL11508.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_284_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23869..25005
DNA (1137bp) protein (379aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component n=3 Tax=Roseburia intestinalis RepID=D4KQ64_9FIRM
TRAP-type C4-dicarboxylate transport system, periplasmic component
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EEV01363.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_284_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25098..25619
DNA (522bp) protein (174aa)
TRAP-type C4-dicarboxylate transport system, small permease component n=3 Tax=Roseburia intestinalis RepID=D4KQ65_9FIRM
TRAP-type C4-dicarboxylate transport system, small permease component
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:CBL11510.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_284_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25619..26923
DNA (1305bp) protein (435aa)
TRAP transporter, DctM subunit n=4 Tax=Roseburia RepID=D4KQ66_9FIRM
TRAP transporter, DctM subunit
TRAP transporter DctM subunit {ECO:0000313|EMBL:CDA57027.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_284_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26949..27422
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6AYY3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09019.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_284_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27391..29001
DNA (1611bp) protein (537aa)
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA02_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEV01351.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_284_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28973..29800
DNA (828bp) protein (276aa)
Two component transcriptional regulator, AraC family n=2 Tax=Roseburia intestinalis RepID=D4KQ70_9FIRM
two component transcriptional regulator, AraC family
Two component transcriptional regulator, AraC family {ECO:0000313|EMBL:CBL09022.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_284_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29801..30808
DNA (1008bp) protein (336aa)
TRAP transporter solute receptor, DctP family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA04_9FIRM
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EEV01353.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L2_023_000G1_scaffold_284_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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30819..31988
DNA (1170bp) protein (390aa)
Transporter, major facilitator family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GA05_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEV01354.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Fucose permease
L2_023_000G1_scaffold_284_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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32011..32364
DNA (354bp) protein (118aa)
Cupin domain n=3 Tax=Roseburia RepID=D4KVX7_9FIRM
Cupin domain.
Cupin domain protein {ECO:0000313|EMBL:EEV01355.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_284_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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32361..32555
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVX8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11518.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Displaying items 1-30 of 82 in total

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