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L2_023_000G1_scaffold_298

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_298_1
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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121..1005
DNA (885bp) protein (295aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6R0_CLOSW
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:EXG85271.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
binding-protein-dependent transport system inner membrane protein
L2_023_000G1_scaffold_298_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1005..1850
DNA (846bp) protein (282aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HV29_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCY33555.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
binding-protein-dependent transport system inner membrane protein
L2_023_000G1_scaffold_298_3
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1949..2827)
DNA (879bp) protein (293aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMI3_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CDB51518.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_023_000G1_scaffold_298_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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3130..4686
DNA (1557bp) protein (519aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
carboxylesterase (EC:3.1.1.1)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R9R5_9FIRM
L2_023_000G1_scaffold_298_5
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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4785..5117
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J7W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30213.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
RNA-directed DNA polymerase
L2_023_000G1_scaffold_298_6
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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5544..7532
DNA (1989bp) protein (663aa)
Putative two-component response regulator n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6PLD7_9FIRM
Putative two-component response regulator {ECO:0000313|EMBL:CDC10522.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
response regulator
L2_023_000G1_scaffold_298_7
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7551..8978
DNA (1428bp) protein (476aa)
Arylsulfatase {ECO:0000313|EMBL:EEX22756.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEX22756.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Choline-sulfatase (EC:3.1.6.6)
Arylsulfatase n=2 Tax=Lachnospiraceae RepID=C9L4S2_BLAHA
L2_023_000G1_scaffold_298_8
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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9072..11900
DNA (2829bp) protein (943aa)
Polysaccharide lyase family 8 n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6PLD2_9FIRM
Polysaccharide lyase family 8 {ECO:0000313|EMBL:CDC10517.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
putative polysaccharide lyase
L2_023_000G1_scaffold_298_9
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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12145..13773
DNA (1629bp) protein (543aa)
ABC transporter, solute-binding protein n=2 Tax=Lachnospiraceae RepID=C9L4S0_BLAHA
Putative sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDC10515.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
ABC transporter substrate-binding protein
L2_023_000G1_scaffold_298_10
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13846..14775
DNA (930bp) protein (310aa)
ABC transporter, permease protein n=2 Tax=Lachnospiraceae RepID=C9L4R9_BLAHA
ABC transporter, permease protein {ECO:0000313|EMBL:EEX22753.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
sugar ABC transporter permease
L2_023_000G1_scaffold_298_11
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14789..15682
DNA (894bp) protein (298aa)
ABC transporter, permease protein n=2 Tax=Lachnospiraceae RepID=C9L4R8_BLAHA
ABC transporter, permease protein {ECO:0000313|EMBL:EEX22752.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
sugar ABC transporter permease
L2_023_000G1_scaffold_298_12
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15692..17068
DNA (1377bp) protein (459aa)
Arylsulfatase {ECO:0000313|EMBL:EEX22751.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEX22751.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
yidJ; sulfatase yidj (EC:3.1.6.-)
Arylsulfatase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4R7_BLAHA
L2_023_000G1_scaffold_298_13
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17070..18029
DNA (960bp) protein (320aa)
Glycosyl hydrolase, family 43 n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4R6_BLAHA
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EEX22750.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
beta-xylosidase
L2_023_000G1_scaffold_298_14
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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18001..19455
DNA (1455bp) protein (485aa)
Mucin-desulfating sulfatase n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NWA5_9FIRM
Mucin-desulfating sulfatase {ECO:0000313|EMBL:CDC10506.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
N-acetylgalactosamine 6-sulfate sulfatase
L2_023_000G1_scaffold_298_15
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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19484..20662
DNA (1179bp) protein (393aa)
Glycosyl hydrolase, family 88 n=2 Tax=Lachnospiraceae RepID=C9L4R4_BLAHA
Glucuronyl hydrolase {ECO:0000313|EMBL:CDC10503.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
glycosyl hydrolase family protein
L2_023_000G1_scaffold_298_16
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20674..22053
DNA (1380bp) protein (460aa)
Arylsulfatase {ECO:0000313|EMBL:EEX22747.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEX22747.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Arylsulfatase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4R3_BLAHA
sulfatase
L2_023_000G1_scaffold_298_17
unknown

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22171..22347
DNA (177bp) protein (59aa)

This feature has no annotations

L2_023_000G1_scaffold_298_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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22518..23966
DNA (1449bp) protein (483aa)
Orn/Lys/Arg decarboxylase family protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R9J3_9FIRM
Orn/Lys/Arg decarboxylase family protein {ECO:0000313|EMBL:CDC45563.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Arginine/lysine/ornithine decarboxylases
L2_023_000G1_scaffold_298_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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23959..24546
DNA (588bp) protein (196aa)
Guanylate kinase (EC:2.7.4.8)
Putative guanylate kinase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RA72_9FIRM
Putative guanylate kinase {ECO:0000313|EMBL:CDC44770.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_023_000G1_scaffold_298_20
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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24625..25614
DNA (990bp) protein (330aa)
DNA polymerase III, delta' subunit n=3 Tax=Lachnospiraceae RepID=C9L9G8_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC10770.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L2_023_000G1_scaffold_298_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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25617..26501
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SDS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44767.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
PSP1 domain-containing protein
L2_023_000G1_scaffold_298_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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26532..27284
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RNV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44766.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted O-methyltransferase
L2_023_000G1_scaffold_298_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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27281..28123
DNA (843bp) protein (281aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RA67_9FIRM
conserved hypothetical protein TIGR00096
L2_023_000G1_scaffold_298_24
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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28152..29384
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AE50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83934.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
L2_023_000G1_scaffold_298_25
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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29435..30049
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6NF24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10758.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
nucleoside recognition domain-containing protein
L2_023_000G1_scaffold_298_26
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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30153..31139
DNA (987bp) protein (329aa)
ABC-type uncharacterized transport system periplasmic component n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XPP9_9FIRM
ABC-type uncharacterized transport system periplasmic component {ECO:0000313|EMBL:CDA14489.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
ABC-type uncharacterized transport system, periplasmic component
L2_023_000G1_scaffold_298_27
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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31162..32103
DNA (942bp) protein (314aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VAZ9_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03504.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
ABC-type uncharacterized transport system, permease component
L2_023_000G1_scaffold_298_28
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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32103..32906
DNA (804bp) protein (268aa)
ABC transporter, ATP-binding protein n=2 Tax=Coprococcus RepID=C0BEN1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG88308.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
ABC-type uncharacterized transport system, ATPase component
L2_023_000G1_scaffold_298_29
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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32974..34284
DNA (1311bp) protein (437aa)
MATE efflux family protein n=3 Tax=Lachnospiraceae RepID=C9L850_BLAHA
MATE efflux family protein {ECO:0000313|EMBL:EEX21542.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
MATE efflux family protein
L2_023_000G1_scaffold_298_30
unknown

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34444..34698
DNA (255bp) protein (85aa)

This feature has no annotations

Displaying items 1-30 of 53 in total

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