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L2_023_000G1_scaffold_323

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_323_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(204..1064)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61662.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_023_000G1_scaffold_323_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1170..1652)
DNA (483bp) protein (161aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG7_9FIRM
L2_023_000G1_scaffold_323_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1681..3288)
DNA (1608bp) protein (536aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG6_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEQ61660.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L2_023_000G1_scaffold_323_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3449..4924)
DNA (1476bp) protein (492aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Stage IV sporulation protein A n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG5_9FIRM
stage IV sporulation protein A
L2_023_000G1_scaffold_323_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5131..5625)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61658.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L2_023_000G1_scaffold_323_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5785..6495)
DNA (711bp) protein (237aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RUG9_9CLOT
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ10587.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
L2_023_000G1_scaffold_323_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6510..7268)
DNA (759bp) protein (253aa)
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:KJJ76539.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJJ76539.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HLM0_9CLOT
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-)
L2_023_000G1_scaffold_323_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7270..8343)
DNA (1074bp) protein (358aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG2_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ61656.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-)
L2_023_000G1_scaffold_323_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8352..9233)
DNA (882bp) protein (294aa)
High-affinity branched-chain amino acid ABC transporter, permease protein LivH n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG1_9FIRM
High-affinity branched-chain amino acid ABC transporter, permease protein LivH {ECO:0000313|EMBL:EEQ61655.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
inner-membrane translocator
L2_023_000G1_scaffold_323_10
unknown

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comp(9212..9340)
DNA (129bp) protein (43aa)

This feature has no annotations

L2_023_000G1_scaffold_323_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9406..10617)
DNA (1212bp) protein (404aa)
Receptor family ligand-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG0_9FIRM
Receptor family ligand-binding protein {ECO:0000313|EMBL:EEQ61654.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)
L2_023_000G1_scaffold_323_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10863..11876)
DNA (1014bp) protein (338aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUF9_9FIRM
L2_023_000G1_scaffold_323_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11901..12536)
DNA (636bp) protein (212aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUF8_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_023_000G1_scaffold_323_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12559..13887)
DNA (1329bp) protein (443aa)
GTPase Der n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUF7_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ribosome-associated GTPase EngA
L2_023_000G1_scaffold_323_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13913..14110)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61650.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_023_000G1_scaffold_323_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14380..15585
DNA (1206bp) protein (402aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EEQ61648.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EEQ61648.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUF4_9FIRM
L2_023_000G1_scaffold_323_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15739..16593)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUF2_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
conserved hypothetical protein TIGR00726
L2_023_000G1_scaffold_323_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16679..17035)
DNA (357bp) protein (119aa)
UPF0102 protein CBFG_05357 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUF1_9FIRM
UPF0102 protein CBFG_05357 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
conserved hypothetical protein TIGR00252
L2_023_000G1_scaffold_323_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17013..17672)
DNA (660bp) protein (220aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUF0_9FIRM
L2_023_000G1_scaffold_323_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17704..18567)
DNA (864bp) protein (288aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUE9_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ribosome biogenesis GTP-binding protein YlqF
L2_023_000G1_scaffold_323_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18582..19121)
DNA (540bp) protein (180aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Signal peptidase I n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUE8_9FIRM
signal peptidase I
L2_023_000G1_scaffold_323_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19268..19615)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUE7_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
50S ribosomal protein L19
L2_023_000G1_scaffold_323_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19765..21045)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61640.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_023_000G1_scaffold_323_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21134..22186)
DNA (1053bp) protein (351aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUE5_9FIRM
tRNA (guanine-N1)-methyltransferase
L2_023_000G1_scaffold_323_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22183..24888)
DNA (2706bp) protein (902aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUE4_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
DNA mismatch repair protein MutS
L2_023_000G1_scaffold_323_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24977..26491)
DNA (1515bp) protein (505aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUE3_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L2_023_000G1_scaffold_323_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26679..28928)
DNA (2250bp) protein (750aa)
Putative beta-galactosidase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUE2_9FIRM
Putative beta-galactosidase {ECO:0000313|EMBL:EEQ61636.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
beta-galactosidase
L2_023_000G1_scaffold_323_28
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28955..29788)
DNA (834bp) protein (278aa)
ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUE1_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEQ61635.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
sugar ABC transporter permease
L2_023_000G1_scaffold_323_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29790..30719)
DNA (930bp) protein (310aa)
Putative L-arabinose transport system permease protein AraP n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUE0_9FIRM
Putative L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:EEQ61634.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
binding-protein-dependent transporters inner membrane component
L2_023_000G1_scaffold_323_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30821..32149)
DNA (1329bp) protein (443aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUD9_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEQ61633.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
family 1 extracellular solute-binding protein
Displaying items 1-30 of 64 in total

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