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L2_023_000G1_scaffold_327

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_327_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41..3304)
DNA (3264bp) protein (1088aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WHC0_BIFBI
UPF0182 protein BBBF_0691 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_023_000G1_scaffold_327_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3415..4707
DNA (1293bp) protein (431aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
nagZ; beta-hexosaminidase (EC:3.2.1.52)
Beta-hexosaminidase n=2 Tax=Bifidobacterium bifidum RepID=I3WHB9_BIFBI
L2_023_000G1_scaffold_327_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4722..5804)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WHB8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83180.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_023_000G1_scaffold_327_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5801..6622)
DNA (822bp) protein (274aa)
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:KFI42762.1}; EC=3.6.3.27 {ECO:0000313|EMBL:KFI42762.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Lipoprotein releasing system, ATP-binding family protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BY88_BIFBI
ABC transporter ATP-binding protein
L2_023_000G1_scaffold_327_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6619..7719)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V8Y4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50076.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_023_000G1_scaffold_327_6
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7810..8355
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H741_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22072.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_023_000G1_scaffold_327_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8237..9604)
DNA (1368bp) protein (456aa)
Acetylornithinedeacetylase/Succinyl-diaminopimelate desuccinylase n=3 Tax=Bifidobacterium RepID=I3WHB5_BIFBI
argE; acetylornithinedeacetylase/Succinyl-diaminopimelate desuccinylase
Acetylornithinedeacetylase/Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:AFL04278.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_327_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9747..10349
DNA (603bp) protein (201aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=E4V8Y2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF16479.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_023_000G1_scaffold_327_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10602..12092
DNA (1491bp) protein (497aa)
Dihydrolipoamide dehydrogenase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MWV9_BIFBI
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:EKF16478.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
pdhD; dihydrolipoamide dehydrogenase
L2_023_000G1_scaffold_327_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12124..12996
DNA (873bp) protein (291aa)
Integral membrane protein n=5 Tax=Bifidobacterium RepID=I3WHB2_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83173.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
integral membrane protein
L2_023_000G1_scaffold_327_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13312..14760
DNA (1449bp) protein (483aa)
glnA; glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Glutamine synthetase n=8 Tax=Bifidobacterium RepID=E3EQ02_BIFBS
L2_023_000G1_scaffold_327_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14823..15035)
DNA (213bp) protein (71aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WHB0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04273.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_023_000G1_scaffold_327_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15041..16069)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=I3WHA9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52922.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_327_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16212..17318)
DNA (1107bp) protein (369aa)
Cell division protein, FtsK/SpoIIIE n=4 Tax=Bifidobacterium RepID=I3WHA8_BIFBI
cell division protein, FtsK/SpoIIIE
Putative ftsK/spoIIIE family protein {ECO:0000313|EMBL:ADO52921.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_327_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17311..17484)
DNA (174bp) protein (58aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WHA7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52920.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_327_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17481..17879)
DNA (399bp) protein (133aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WHA6_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52919.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_327_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18022..18588
DNA (567bp) protein (189aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WHA5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52918.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_327_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18650..19522
DNA (873bp) protein (291aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=I3WHA4_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52917.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_327_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19723..20436)
DNA (714bp) protein (238aa)
XhoI-like restriction endonuclease n=3 Tax=Bifidobacterium RepID=E3EPZ4_BIFBS
XhoI-like restriction endonuclease
XhoI-like restriction endonuclease {ECO:0000313|EMBL:ADO52916.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_327_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20433..22025)
DNA (1593bp) protein (531aa)
Type II methyltransferase n=3 Tax=Bifidobacterium RepID=E3EPZ3_BIFBS
Type II methyltransferase {ECO:0000313|EMBL:CDB22087.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
type II methyltransferase
L2_023_000G1_scaffold_327_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22169..23413)
DNA (1245bp) protein (415aa)
Integrase/recombinase (XerD/RipX family) n=3 Tax=Bifidobacterium RepID=E3EPZ2_BIFBS
Integrase/recombinase
Integrase/recombinase {ECO:0000313|EMBL:EKE50825.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_023_000G1_scaffold_327_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23883..24716
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4V8W7_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50059.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_023_000G1_scaffold_327_23
unknown

Not on your lists

comp(24710..24847)
DNA (138bp) protein (46aa)

This feature has no annotations

L2_023_000G1_scaffold_327_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24844..25974)
DNA (1131bp) protein (377aa)
Mrp ATPase family protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LFF8_BIFBI
Mrp ATPase family protein {ECO:0000313|EMBL:EKF16474.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
mrp; ATP-binding Mrp-like protein
L2_023_000G1_scaffold_327_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26200..28902)
DNA (2703bp) protein (901aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
DNA ligase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I7D7_BIFBI
ligA; NAD-dependent DNA ligase
L2_023_000G1_scaffold_327_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28989..32498)
DNA (3510bp) protein (1170aa)
Tetratricopeptide repeat protein n=2 Tax=Bifidobacterium bifidum RepID=E4V8W4_BIFBI
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFR50056.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_023_000G1_scaffold_327_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32570..34741
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IPW5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE50830.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
putative PMT family glycosyl transferase
L2_023_000G1_scaffold_327_28
unknown

Not on your lists

comp(34708..34800)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_023_000G1_scaffold_327_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34911..35435
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPY6_BIFBS
arylsulfotransferase domain (ASST)
Uncharacterized protein {ECO:0000313|EMBL:ADO52908.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_023_000G1_scaffold_327_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35556..36344
DNA (789bp) protein (263aa)
ABC transporter ATP-binding protein (EC:3.6.3.28)
ATP-binding protein of ABC transporter system n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P104_BIFBP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF16069.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Displaying items 1-30 of 87 in total

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