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L2_023_000G1_scaffold_340

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_340_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(621..998)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=4 Tax=Roseburia RepID=D4KM99_9FIRM
LSU ribosomal protein L12P
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_340_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1087..1650)
DNA (564bp) protein (188aa)
50S ribosomal protein L10 n=2 Tax=Roseburia RepID=C7G6S3_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
rplJ; 50S ribosomal protein L10
L2_023_000G1_scaffold_340_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1973..2668)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=4 Tax=Roseburia RepID=D4KM98_9FIRM
ribosomal protein L1, bacterial/chloroplast
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_340_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2808..3233)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=4 Tax=Roseburia RepID=D4KM97_9FIRM
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_340_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3304..3822)
DNA (519bp) protein (173aa)
Transcription termination/antitermination protein NusG n=4 Tax=Roseburia RepID=D4KM96_9FIRM
transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_340_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3840..4055)
DNA (216bp) protein (72aa)
Protein translocase subunit SecE n=4 Tax=Roseburia RepID=D4KM95_9FIRM
protein translocase subunit secE/sec61 gamma
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_340_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4557..5912
DNA (1356bp) protein (452aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KM93_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07995.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_340_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6005..7189)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02482.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_023_000G1_scaffold_340_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7280..8545)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KM91_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07993.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_340_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8558..10144)
DNA (1587bp) protein (529aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYW2_9FIRM
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
Uncharacterized protein {ECO:0000313|EMBL:CBL12552.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_340_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10217..11410)
DNA (1194bp) protein (398aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYW1_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL12551.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_340_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11413..13125)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B6C0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54501.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L2_023_000G1_scaffold_340_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13246..14259
DNA (1014bp) protein (338aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYV8_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL12548.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_340_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14296..14889)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BMC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54497.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_023_000G1_scaffold_340_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14889..15143)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54495.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_023_000G1_scaffold_340_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15148..15705)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B0F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54494.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_023_000G1_scaffold_340_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15752..17092)
DNA (1341bp) protein (447aa)
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BM80_9FIRM
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis {ECO:0000313|EMBL:CDA54492.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
L2_023_000G1_scaffold_340_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17111..17881)
DNA (771bp) protein (257aa)
rfbF; glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATY8_9FIRM
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:CDA54490.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_340_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17884..18945)
DNA (1062bp) protein (354aa)
CDP-glucose 4,6-dehydratase (EC:4.2.1.45)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AR78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54488.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_340_20
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19023..19802)
DNA (780bp) protein (260aa)
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Eubacterium sp. 14-2 RepID=S0J772_9FIRM
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:EOT23588.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
glucose-1-phosphate cytidylyltransferase
L2_023_000G1_scaffold_340_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19799..20737)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AR72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54483.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
NAD-dependent epimerase/dehydratase
L2_023_000G1_scaffold_340_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20746..22548)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B683_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54481.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
thiamine pyrophosphate protein TPP binding domain-containing protein
L2_023_000G1_scaffold_340_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22559..23623)
DNA (1065bp) protein (355aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B0D6_9FIRM
3-dehydroquinate synthase {ECO:0000256|SAAS:SAAS00196478}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_340_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23620..24285)
DNA (666bp) protein (222aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AR66_9FIRM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDA54478.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
short-chain dehydrogenase/reductase SDR
L2_023_000G1_scaffold_340_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24288..25910)
DNA (1623bp) protein (541aa)
Isopropylmalate/homocitrate/citramalate synthases (EC:4.1.3.39)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BM67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54477.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_340_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25912..27636)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54475.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
glycosyl transferase 2 family protein
L2_023_000G1_scaffold_340_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27781..28608)
DNA (828bp) protein (276aa)
Flagellin n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BM61_9FIRM
Flagellin {ECO:0000313|EMBL:CDA54472.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
flagellin
L2_023_000G1_scaffold_340_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28734..29858)
DNA (1125bp) protein (375aa)
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATW4_9FIRM
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase {ECO:0000313|EMBL:CDA54470.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
glutamine--scyllo-inositol transaminase
L2_023_000G1_scaffold_340_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29882..30946)
DNA (1065bp) protein (355aa)
Pseudaminic acid biosynthesis-associated protein PseG n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BM55_9FIRM
Pseudaminic acid biosynthesis-associated protein PseG {ECO:0000313|EMBL:CDA54467.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
spore coat polysaccharide biosynthesis protein
L2_023_000G1_scaffold_340_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30943..31977)
DNA (1035bp) protein (345aa)
Pseudaminic acid synthase {ECO:0000313|EMBL:EEV02469.1}; EC=2.5.1.- {ECO:0000313|EMBL:EEV02469.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Pseudaminic acid synthase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6U6_9FIRM
N-acylneuraminate-9-phosphate synthase
Displaying items 1-30 of 63 in total

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