ggKbase home page

L2_023_000G1_scaffold_373

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_373_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(646..1098)
DNA (453bp) protein (151aa)
Peroxide-responsive repressor PerR n=51 Tax=Staphylococcus epidermidis RepID=PERR_STAEQ
Peroxide stress regulator PerR, FUR family
Peroxide-responsive repressor PerR {ECO:0000313|EMBL:EFE58561.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_373_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1194..2144)
DNA (951bp) protein (317aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFE58560.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFE58560.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
4-phosphoerythronate dehydrogenase n=28 Tax=Staphylococcus epidermidis RepID=D4FMG7_STAEP
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein
L2_023_000G1_scaffold_373_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2147..2605)
DNA (459bp) protein (153aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EFE58559.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFE58559.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Bacterioferritin comigratory protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HN72_STAEQ
bcp; bacterioferritin comigratory protein
L2_023_000G1_scaffold_373_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2686..3975
DNA (1290bp) protein (430aa)
Glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase 2 {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA 2 {ECO:0000255|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000255|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminotransferase 2 {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA-AT 2 {ECO:0000255|HAMAP-Rule:MF_00375};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Glutamate-1-semialdehyde 2,1-aminomutase 2 n=49 Tax=Staphylococcus epidermidis RepID=GSA2_STAEQ
L2_023_000G1_scaffold_373_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4282..5376
DNA (1095bp) protein (365aa)
Uncharacterized protein n=33 Tax=Staphylococcus epidermidis RepID=Q5HN70_STAEQ
lipoprotein, putative; Hypothetical protein SAV1865
Uncharacterized protein {ECO:0000313|EMBL:AAW54743.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_023_000G1_scaffold_373_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5536..7272)
DNA (1737bp) protein (579aa)
ABC transporter, permease/ATP-binding protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HN69_STAEQ
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:AAW54752.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Lipid A export ATP-binding/permease protein MsbA
L2_023_000G1_scaffold_373_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7514..8056)
DNA (543bp) protein (181aa)
UPF0374 protein SERP1405 n=83 Tax=Staphylococcus epidermidis RepID=Y1405_STAEQ
Cysteinyl-tRNA synthetase related protein
UPF0374 protein HMPREF0791_0231 {ECO:0000256|HAMAP-Rule:MF_01568}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_023_000G1_scaffold_373_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8163..9206)
DNA (1044bp) protein (348aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:AAW54755.1}; EC=3.2.2.- {ECO:0000313|EMBL:AAW54755.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
A/G-specific adenine glycosylase n=39 Tax=Staphylococcus epidermidis RepID=Q5HN66_STAEQ
L2_023_000G1_scaffold_373_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9387..10361
DNA (975bp) protein (325aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HN65_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54756.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_023_000G1_scaffold_373_10

Not on your lists

comp(10547..11377)
DNA (831bp) protein (277aa)
Uncharacterized protein n=36 Tax=Staphylococcus epidermidis RepID=Q5HN64_STAEQ
Teichoic acid translocation permease protein TagG
ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ21410.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_023_000G1_scaffold_373_11

Not on your lists

comp(11386..12903)
DNA (1518bp) protein (506aa)
Teichoic acid export ATP-binding protein TagH (EC:3.6.3.40)
ABC transporter, ATP-binding protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HN63_STAEQ
ABC superfamily ATP binding cassette transporter, ABC protein {ECO:0000313|EMBL:ETJ21411.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_023_000G1_scaffold_373_12

Not on your lists

comp(12919..13233)
DNA (315bp) protein (105aa)
Uncharacterized protein n=75 Tax=Staphylococcus epidermidis RepID=Q8CRW0_STAES
hypothetical protein
Conserved protein YfhH {ECO:0000313|EMBL:ETJ21412.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_023_000G1_scaffold_373_13

Not on your lists

comp(13226..14029)
DNA (804bp) protein (268aa)
Regulatory protein RecX n=1 Tax=Staphylococcus epidermidis NIHLM001 RepID=J0HW07_STAEP
Regulatory protein RecX {ECO:0000313|EMBL:ETJ21413.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Regulatory protein recX
L2_023_000G1_scaffold_373_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14307..15116)
DNA (810bp) protein (270aa)
Monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Monofunctional glycosyltransferase {ECO:0000256|HAMAP-Rule:MF_01434}; Short=MGT {ECO:0000256|HAMAP-Rule:MF_01434};; EC=2.4.-.- {ECO:0000256|HAMAP-Rule:MF_01434};; Peptidoglycan TGase {ECO:0000256|HAMAP-Rule:MF_01434}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Monofunctional glycosyltransferase n=40 Tax=Staphylococcus epidermidis RepID=MGT_STAEQ
L2_023_000G1_scaffold_373_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15437..15955)
DNA (519bp) protein (173aa)
Uncharacterized protein SERP1413 n=45 Tax=Staphylococcus epidermidis RepID=Y1413_STAEQ
ThiJ/PfpI family protein
Intracellular protease, PfpI family {ECO:0000313|EMBL:EFE58547.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_373_16
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16255..16416)
DNA (162bp) protein (54aa)
Uncharacterized protein n=86 Tax=Staphylococcus RepID=L7WV60_STAWS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC90239.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
L2_023_000G1_scaffold_373_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16575..17717
DNA (1143bp) protein (381aa)
Radical SAM superfamily domain protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HN57_STAEQ
Hypothetical protein SAV1877
Radical SAM superfamily domain protein {ECO:0000313|EMBL:AAW54772.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_023_000G1_scaffold_373_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17854..18384)
DNA (531bp) protein (177aa)
Acyl-CoA hydrolase (EC:3.1.2.20)
Cytosolic long-chain acyl-CoA thioester hydrolase family protein n=40 Tax=Staphylococcus epidermidis RepID=Q5HN56_STAEQ
Cytosolic long-chain acyl-CoA thioester hydrolase family protein {ECO:0000313|EMBL:AAW54773.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_023_000G1_scaffold_373_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18464..19705)
DNA (1242bp) protein (414aa)
Aminopeptidase family protein n=27 Tax=Staphylococcus epidermidis RepID=Q5HN55_STAEQ
aminopeptidase
Aminopeptidase family protein {ECO:0000313|EMBL:AAW54774.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_023_000G1_scaffold_373_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19707..19922)
DNA (216bp) protein (72aa)
UPF0435 protein SE_1565 n=77 Tax=Staphylococcus epidermidis RepID=Y1565_STAES
Hypothetical protein YfkK
UPF0435 protein M464_0208985 {ECO:0000256|HAMAP-Rule:MF_00829}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_023_000G1_scaffold_373_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20063..20527
DNA (465bp) protein (155aa)
phosphotyrosine protein phosphatase (EC:3.1.3.48)
Low molecular weight protein-tyrosine-phosphatase PtpA; EC=3.1.3.48;; Phosphotyrosine phosphatase A; Short=PTPase A;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Low molecular weight protein-tyrosine-phosphatase PtpA n=77 Tax=Staphylococcus epidermidis RepID=PTPA_STAEQ
L2_023_000G1_scaffold_373_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20535..20819
DNA (285bp) protein (95aa)
Uncharacterized protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HN52_STAEQ
Hypothetical protein SAV1882
Uncharacterized protein {ECO:0000313|EMBL:EFE58540.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_373_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21226..22404
DNA (1179bp) protein (393aa)
Ribonuclease BN, putative n=46 Tax=Staphylococcus RepID=Q5HN51_STAEQ
yihY; YihY family inner membrane domain protein
YihY family protein {ECO:0000313|EMBL:EFE58539.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_373_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22461..23090)
DNA (630bp) protein (210aa)
Response regulator protein VraR n=51 Tax=Staphylococcus epidermidis RepID=VRAR_STAEQ
Two component transcriptional regulator VraR,LuxR family
Response regulator protein VraR {ECO:0000313|EMBL:EFE58538.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_373_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23080..24126)
DNA (1047bp) protein (349aa)
Sensor protein VraS; EC=2.7.13.3;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Sensor protein VraS n=53 Tax=Staphylococcus epidermidis RepID=VRAS_STAEQ
vraS; sensor histidine kinase VraS
L2_023_000G1_scaffold_373_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24123..24824)
DNA (702bp) protein (234aa)
Uncharacterized protein n=33 Tax=Staphylococcus epidermidis RepID=Q5HN48_STAEQ
Transporter yvqF
Uncharacterized protein {ECO:0000313|EMBL:EFE58536.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_373_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24839..25225)
DNA (387bp) protein (129aa)
Uncharacterized protein n=48 Tax=Staphylococcus epidermidis RepID=C5Q6G4_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58535.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_373_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25383..26138)
DNA (756bp) protein (252aa)
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000255|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000255|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000255|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000255|HAMAP-Rule:MF_01974}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Methionine aminopeptidase n=33 Tax=Staphylococcus epidermidis RepID=MAP1_STAES
L2_023_000G1_scaffold_373_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26312..27298
DNA (987bp) protein (329aa)
UPF0421 protein SERP1427 n=28 Tax=Staphylococcus epidermidis RepID=Y1427_STAEQ
Integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58533.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_023_000G1_scaffold_373_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27449..27985)
DNA (537bp) protein (179aa)
Immunodominant antigen B, putative n=38 Tax=Staphylococcus epidermidis RepID=Q5HN44_STAEQ
Immunodominant antigen B
Uncharacterized protein {ECO:0000313|EMBL:EFE58532.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying items 1-30 of 62 in total

View Taxonomy