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L2_023_000G1_scaffold_416

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_416_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(421..1824)
DNA (1404bp) protein (468aa)
nagE; PTS system, N-acetylglucosamine-specific IIBC component (EC:2.7.1.69)
PTS system, N-acetylglucosamine-specific IIBC component n=1 Tax=Clostridium colicanis 209318 RepID=N9WMC9_9CLOT
PTS sugar transporter {ECO:0000313|EMBL:KJU70434.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_023_000G1_scaffold_416_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2259..2765
DNA (507bp) protein (169aa)
ptsG: PTS system glucose-specific EIIBCA component (EC:2.7.1.69 2.7.1.-)
PtsG: PTS system glucose-specific EIIBCA component {ECO:0000313|EMBL:AGX45326.1}; EC=2.7.1.- {ECO:0000313|EMBL:AGX45326.1};; EC=2.7.1.69 {ECO:0000313|EMBL:AGX45326.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
PtsG: PTS system glucose-specific EIIBCA component n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N066_CLOSA
L2_023_000G1_scaffold_416_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2807..4456)
DNA (1650bp) protein (550aa)
PTS system, glucose-like IIB component (EC:2.7.1.69 2.7.1.-)
PTS system, glucose-like IIB component {ECO:0000313|EMBL:ACD23325.1}; EC=2.7.1.- {ECO:0000313|EMBL:ACD23325.1};; EC=2.7.1.69 {ECO:0000313|EMBL:ACD23325.1};; PTS system, glucose-specific IIABC component {ECO:0000313|EMBL:CDH92316.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDH92316.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
PTS system, glucose-like IIB component n=2 Tax=Clostridium botulinum B RepID=B2TR31_CLOBB
L2_023_000G1_scaffold_416_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4716..5561)
DNA (846bp) protein (282aa)
Transcriptional antiterminator, BglG family n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZR9_CLOBO
Transcriptional antiterminator, BglG family {ECO:0000313|EMBL:EES47709.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
transcription antiterminator LicT
L2_023_000G1_scaffold_416_5
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5565..6500)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XWG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ04053.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
acetyltransferase family protein
L2_023_000G1_scaffold_416_6
unknown

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comp(6744..6935)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_023_000G1_scaffold_416_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6982..7323
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FQK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG03084.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_023_000G1_scaffold_416_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7444..8202)
DNA (759bp) protein (253aa)
Putative UBA/THIF-type NAD/FAD binding protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F2K1_9CLOT
Putative UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:CDG02851.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
UBA/THIF-type NAD/FAD binding protein
L2_023_000G1_scaffold_416_9
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8348..9217
DNA (870bp) protein (290aa)
Putative membrane-associated protease n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENV1_9CLOT
Putative membrane-associated protease {ECO:0000313|EMBL:CDG02852.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
CAAX amino terminal protease
L2_023_000G1_scaffold_416_10
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9274..9969
DNA (696bp) protein (232aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN (EC:3.2.2.9)
MTA/SAH nucleosidase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KML0_9CLOT
L2_023_000G1_scaffold_416_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10019..11137
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98305.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
metallophosphoesterase
L2_023_000G1_scaffold_416_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11166..12584)
DNA (1419bp) protein (473aa)
methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A2589
methyl-accepting chemotaxis (MCP) signaling domain protein
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:AIY84019.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_023_000G1_scaffold_416_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12708..13964)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXM2_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45335.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_023_000G1_scaffold_416_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13986..14894)
DNA (909bp) protein (303aa)
serA; D-3-phosphoglycerate dehydrogenase SerA (EC:1.1.1.95)
Phosphoglycerate dehydrogenase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHA5_9CLOT
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EEH99762.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_023_000G1_scaffold_416_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14971..16044)
DNA (1074bp) protein (358aa)
Putative phosphoserine aminotransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIQ6_9CLOT
Putative phosphoserine aminotransferase {ECO:0000313|EMBL:EEH99761.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
aspartate aminotransferase
L2_023_000G1_scaffold_416_16
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16257..16442)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7L4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ02403.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L2_023_000G1_scaffold_416_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16549..17775)
DNA (1227bp) protein (409aa)
ABC transporter permease n=1 Tax=Clostridium botulinum RepID=UPI0003745B8D
ABC-2 transporter family protein
ABC-2 transporter family protein {ECO:0000313|EMBL:AIY82760.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_023_000G1_scaffold_416_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17775..18689)
DNA (915bp) protein (305aa)
ABC transporter n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT48_9CLOT
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY83476.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_023_000G1_scaffold_416_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19014..19289)
DNA (276bp) protein (92aa)
Putative Sigma-K factor processing regulatory protein BofA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUE0_9CLOT
Putative Sigma-K factor processing regulatory protein BofA {ECO:0000313|EMBL:CDG02860.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
bofA; pro-sigmaK processing inhibitor BofA family protein
L2_023_000G1_scaffold_416_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19309..19587)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V0V9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES47757.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_023_000G1_scaffold_416_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19801..20397)
DNA (597bp) protein (199aa)
Recombination protein RecR n=4 Tax=Clostridium butyricum RepID=B1QY73_CLOBU
recR; recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_023_000G1_scaffold_416_22
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20468..20812)
DNA (345bp) protein (115aa)
Nucleoid-associated protein CCH01_000160 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUE5_9CLOT
Nucleoid-associated protein CCH01_000160 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
DNA-binding protein, YbaB/EbfC family
L2_023_000G1_scaffold_416_23
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20879..22528)
DNA (1650bp) protein (550aa)
dnaX; DNA polymerase III, subunit gamma and tau (EC:2.7.7.7)
Putative DNA polymerase III, gamma and tau subunit n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F2L7_9CLOT
Putative DNA polymerase III, gamma and tau subunit {ECO:0000313|EMBL:CDG02866.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
L2_023_000G1_scaffold_416_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22644..23435
DNA (792bp) protein (264aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
thyA; Thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QP43_9CLOT
L2_023_000G1_scaffold_416_25
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23435..23926
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Dihydrofolate reductase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FCT7_9CLOT
dihydrofolate reductase family protein
L2_023_000G1_scaffold_416_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24576..25343)
DNA (768bp) protein (256aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium botulinum RepID=UPI0002FCF31B
lgt; prolipoprotein diacylglyceryl transferase
L2_023_000G1_scaffold_416_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25347..25808)
DNA (462bp) protein (154aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
tRNA-specific adenosine deaminase TadA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0A2_CLOSA
tadA; tRNA-specific adenosine deaminase TadA
L2_023_000G1_scaffold_416_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25862..27043)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBQ6_9CLOT
transporter associated domain protein
Transporter associated domain protein {ECO:0000313|EMBL:AIY84866.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_023_000G1_scaffold_416_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27495..29897)
DNA (2403bp) protein (801aa)
P-type ATPase-metal cation transport n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZL4_CLOBO
Carbonate dehydratase {ECO:0000313|EMBL:KJU72533.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
HAD ATPase, P-type, IC family protein
L2_023_000G1_scaffold_416_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30075..30935)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028868DE
DegV family protein
DegV family protein {ECO:0000313|EMBL:CDH91802.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Displaying items 1-30 of 59 in total

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