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L2_023_000G1_scaffold_422

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_422_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23..427)
DNA (405bp) protein (135aa)
Crossover junction endodeoxyribonuclease RusA n=2 Tax=Clostridiales RepID=B0A919_9FIRM
Crossover junction endodeoxyribonuclease RusA {ECO:0000313|EMBL:CDA09536.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
RusA-like endodeoxyribonuclease
L2_023_000G1_scaffold_422_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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490..1401
DNA (912bp) protein (304aa)
Putative iron-sulfur cluster-binding protein n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0A918_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI93512.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
putative iron-sulfur cluster-binding protein
L2_023_000G1_scaffold_422_3
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1498..3708
DNA (2211bp) protein (737aa)
Putative ATP-dependent protease n=2 Tax=Clostridiales RepID=B0A917_9FIRM
Putative ATP-dependent protease {ECO:0000313|EMBL:CDA09538.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ATP-binding protein
L2_023_000G1_scaffold_422_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3899..4528
DNA (630bp) protein (210aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Endonuclease III n=2 Tax=Clostridiales RepID=B0A916_9FIRM
endonuclease III
L2_023_000G1_scaffold_422_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4550..5899
DNA (1350bp) protein (450aa)
G5 domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A915_9FIRM
G5 domain protein {ECO:0000313|EMBL:EDQ96916.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
VanW family protein
L2_023_000G1_scaffold_422_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6032..6502
DNA (471bp) protein (157aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=3 Tax=Clostridiales RepID=B0A914_9FIRM
RNA methylase
L2_023_000G1_scaffold_422_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6531..7373
DNA (843bp) protein (281aa)
EDD domain protein, DegV family n=2 Tax=Clostridiales RepID=B0A913_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDA09542.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_023_000G1_scaffold_422_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7724..8755
DNA (1032bp) protein (344aa)
Basic membrane protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A912_9FIRM
Basic membrane protein {ECO:0000313|EMBL:EDQ96913.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
lipoprotein, Bmp family
L2_023_000G1_scaffold_422_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9116..10165
DNA (1050bp) protein (350aa)
Basic membrane protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XAY7_9CLOT
Basic membrane protein {ECO:0000313|EMBL:CDA09544.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
lipoprotein, Bmp family
L2_023_000G1_scaffold_422_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10330..11901
DNA (1572bp) protein (524aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0A910_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA09545.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
heme ABC transporter ATP-binding protein
L2_023_000G1_scaffold_422_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11891..12982
DNA (1092bp) protein (364aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A909_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDQ96910.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ABC transporter, permease
L2_023_000G1_scaffold_422_12

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12982..13917
DNA (936bp) protein (312aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0A908_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ15277.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Nucleoside transport system permease protein
L2_023_000G1_scaffold_422_13

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14177..14971
DNA (795bp) protein (265aa)
Putative sporulation protein YtxC n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A907_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ15276.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_023_000G1_scaffold_422_14

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15365..17284
DNA (1920bp) protein (640aa)
Threonine--tRNA ligase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XAZ1_9CLOT
Threonine-tRNA ligase {ECO:0000313|EMBL:ETJ15275.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
thrS; threonyl-tRNA synthetase
L2_023_000G1_scaffold_422_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17444..18820)
DNA (1377bp) protein (459aa)
MATE efflux family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A901_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDQ96902.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
putative efflux protein, MATE family
L2_023_000G1_scaffold_422_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19005..20408)
DNA (1404bp) protein (468aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XAZ6_9CLOT
ATP-dependent peptidase
L2_023_000G1_scaffold_422_17

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20891..21487
DNA (597bp) protein (199aa)
Translation initiation factor IF-3 n=213 Tax=Clostridium difficile RepID=Q189N1_CLOD6
Translation initiation factor IF-3 {ECO:0000313|EMBL:ETJ16882.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
infC; translation initiation factor IF-3
L2_023_000G1_scaffold_422_18
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21528..21722
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=2 Tax=Clostridiales RepID=B0A8Z7_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
50S ribosomal protein L35
L2_023_000G1_scaffold_422_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21815..22171
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=2 Tax=Clostridiales RepID=B0A8Z6_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rplT; 50S ribosomal protein L20
L2_023_000G1_scaffold_422_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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22407..23783
DNA (1377bp) protein (459aa)
Potassium uptake protein, TrkH family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Z5_9FIRM
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EDQ96896.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
cation transport protein
L2_023_000G1_scaffold_422_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23806..24489
DNA (684bp) protein (228aa)
TrkA N-terminal domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XB00_9CLOT
TrkA N-terminal domain protein {ECO:0000313|EMBL:CDA09559.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
cation transport protein
L2_023_000G1_scaffold_422_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24510..25307
DNA (798bp) protein (266aa)
Putative RNA methyltransferase, TrmH family, group 3 n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Z3_9FIRM
Putative RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EDQ96894.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
RNA methylase
L2_023_000G1_scaffold_422_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25694..26713
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
pheS; Phenylalanyl-tRNA synthetase alpha chain(Phenylalanine--tRNA ligase alpha chain) (PheRS) (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Clostridiales RepID=B0A8Z2_9FIRM
L2_023_000G1_scaffold_422_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26842..29235
DNA (2394bp) protein (798aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Phenylalanine--tRNA ligase beta subunit n=2 Tax=Clostridiales RepID=B0A8Z1_9FIRM
pheT; phenylalanyl-tRNA synthetase subunit beta
L2_023_000G1_scaffold_422_25

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29264..29881
DNA (618bp) protein (206aa)
Cell division protein ZapA n=2 Tax=Clostridiales RepID=B0A8Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16874.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative cell-division protein
L2_023_000G1_scaffold_422_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30085..31404
DNA (1320bp) protein (440aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Y9_9FIRM
L2_023_000G1_scaffold_422_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31687..34107
DNA (2421bp) protein (807aa)
Peptidase U32 family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X465_9CLOT
Peptidase U32 family {ECO:0000313|EMBL:CDA09565.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
protease
L2_023_000G1_scaffold_422_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34131..34571
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XLW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09566.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L2_023_000G1_scaffold_422_29

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34796..37984
DNA (3189bp) protein (1063aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16869.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
sensor histidine kinase/response regulator
L2_023_000G1_scaffold_422_30

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comp(38047..38244)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16868.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Displaying items 1-30 of 45 in total

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