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L2_023_000G1_scaffold_440

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_440_1
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(375..1082)
DNA (708bp) protein (236aa)
Colicin V production protein n=2 Tax=Roseburia RepID=D4KKH2_9FIRM
Colicin V production protein.
Colicin V production protein {ECO:0000313|EMBL:CDA57199.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_440_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1094..2290)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99458.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_023_000G1_scaffold_440_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2659..3918)
DNA (1260bp) protein (420aa)
LysM domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKH0_9FIRM
LysM domain.
LysM domain {ECO:0000313|EMBL:CBL10850.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_440_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4089..5030)
DNA (942bp) protein (314aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase C-terminal subunit n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BVE0_9FIRM
Transketolase C-terminal subunit {ECO:0000313|EMBL:CDA57202.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_440_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5018..5854)
DNA (837bp) protein (279aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase, N-terminal subunit {ECO:0000313|EMBL:CBL10981.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CBL10981.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Transketolase, N-terminal subunit n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUE1_9FIRM
L2_023_000G1_scaffold_440_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5886..6482)
DNA (597bp) protein (199aa)
Recombination protein RecR n=4 Tax=Roseburia RepID=D4KKG7_9FIRM
Recombinational DNA repair protein (RecF pathway)
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_440_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6687..6842
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GFA6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU99463.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_440_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6918..9554)
DNA (2637bp) protein (879aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EEU99465.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EEU99465.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase n=2 Tax=Roseburia intestinalis RepID=D4KKG5_9FIRM
L2_023_000G1_scaffold_440_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9583..9897)
DNA (315bp) protein (105aa)
Uncharacterized protein conserved in bacteria n=4 Tax=Roseburia RepID=D4KKG4_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDA57210.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_440_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10039..11370)
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFA9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEU99467.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Na+-driven multidrug efflux pump
L2_023_000G1_scaffold_440_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11469..11846)
DNA (378bp) protein (126aa)
Death-on-curing family protein n=4 Tax=Roseburia RepID=D4KKG2_9FIRM
death-on-curing family protein
Death-on-curing family protein {ECO:0000313|EMBL:EEU99468.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_440_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11843..12085)
DNA (243bp) protein (81aa)
Phd_YefM n=4 Tax=Roseburia RepID=D4KKG1_9FIRM
Phd_YefM.
Phd_YefM {ECO:0000313|EMBL:CDA57215.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_440_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12223..12648)
DNA (426bp) protein (142aa)
Flavodoxin, short chain n=4 Tax=Roseburia RepID=D4KUD2_9FIRM
flavodoxin, short chain
Flavodoxin short chain {ECO:0000313|EMBL:CDA57216.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_023_000G1_scaffold_440_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12839..13492)
DNA (654bp) protein (218aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GFB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99471.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_023_000G1_scaffold_440_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13966..14454)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99472.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_023_000G1_scaffold_440_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14454..14726)
DNA (273bp) protein (91aa)
Endonuclease/Exonuclease/phosphatase family n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUC8_9FIRM
Endonuclease/Exonuclease/phosphatase family.
Endonuclease/Exonuclease/phosphatase family {ECO:0000313|EMBL:CBL10837.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_440_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14687..15298)
DNA (612bp) protein (204aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFB5_9FIRM
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EEU99473.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Endonuclease/Exonuclease/phosphatase family.
L2_023_000G1_scaffold_440_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15354..16217)
DNA (864bp) protein (288aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKF6_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL10836.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_440_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16347..17555)
DNA (1209bp) protein (403aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.23)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFB8_9FIRM
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:EEU99476.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_023_000G1_scaffold_440_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17695..18561)
DNA (867bp) protein (289aa)
Uncharacterized conserved protein n=4 Tax=Roseburia RepID=D4KKF4_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL10965.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_023_000G1_scaffold_440_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18674..21241)
DNA (2568bp) protein (856aa)
Signal transduction histidine kinase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKF2_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CBL10832.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Signal transduction histidine kinase
L2_023_000G1_scaffold_440_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21231..22121)
DNA (891bp) protein (297aa)
Bacterial extracellular solute-binding protein n=2 Tax=Roseburia RepID=R6BVG0_9FIRM
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CDA57222.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_023_000G1_scaffold_440_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22341..22940)
DNA (600bp) protein (200aa)
Predicted hydrolase (HD superfamily) n=2 Tax=Roseburia RepID=D4KKF1_9FIRM
Predicted hydrolase (HD superfamily)
Predicted hydrolase (HD superfamily) {ECO:0000313|EMBL:CBL10831.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_440_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22980..23822)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BDQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57226.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_023_000G1_scaffold_440_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23955..25523)
DNA (1569bp) protein (523aa)
Metallophosphoesterase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BVG5_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:CDA57227.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_023_000G1_scaffold_440_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25914..26213)
DNA (300bp) protein (100aa)
Glutaredoxin-related protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B250_9FIRM
Glutaredoxin-related protein {ECO:0000313|EMBL:CDA57230.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Glutaredoxin-related protein
L2_023_000G1_scaffold_440_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26386..28872)
DNA (2487bp) protein (829aa)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKE8_9FIRM
Beta-galactosidase/beta-glucuronidase
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CBL10828.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_440_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28875..30248)
DNA (1374bp) protein (458aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=2 Tax=Roseburia RepID=D4KKE7_9FIRM
sugar (Glycoside-Pentoside-Hexuronide) transporter
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CBL10827.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_440_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30502..31563
DNA (1062bp) protein (354aa)
AraC-type DNA-binding domain-containing proteins n=2 Tax=Roseburia RepID=D4KKE6_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL10826.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_023_000G1_scaffold_440_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31566..31850)
DNA (285bp) protein (95aa)
Acylphosphatases (EC:3.6.1.7)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553, ECO:0000313|EMBL:CBL10962.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Acylphosphatase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUC2_9FIRM
Displaying items 1-30 of 125 in total

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