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L2_023_000G1_scaffold_443

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_443_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..397)
DNA (396bp) protein (132aa)
DNA mismatch repair protein MutL n=3 Tax=Clostridium bolteae RepID=A8RTK7_9CLOT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
DNA mismatch repair protein MutL
L2_023_000G1_scaffold_443_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(969..1472)
DNA (504bp) protein (168aa)
Ribosome maturation factor RimM n=4 Tax=Clostridium bolteae RepID=A8RTK3_9CLOT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
rimM; 16S rRNA-processing protein RimM
L2_023_000G1_scaffold_443_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1608..1835)
DNA (228bp) protein (76aa)
UPF0109 protein CLOBOL_03701 n=18 Tax=Clostridiales RepID=A8RTK2_9CLOT
UPF0109 protein HMPREF1090_01924 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
RNA-binding protein (KH domain)
L2_023_000G1_scaffold_443_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1855..2097)
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=8 Tax=Clostridium RepID=A8RTK1_9CLOT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
SSU ribosomal protein S16P
L2_023_000G1_scaffold_443_5
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2198..3574)
DNA (1377bp) protein (459aa)
Signal recognition particle protein n=7 Tax=Clostridium RepID=A8RTK0_9CLOT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
signal recognition particle protein
L2_023_000G1_scaffold_443_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3619..3963)
DNA (345bp) protein (115aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RTJ9_9CLOT
UPF0122 protein HMPREF1082_04380 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L2_023_000G1_scaffold_443_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4035..4898)
DNA (864bp) protein (288aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RTJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15526.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Predicted transcriptional regulators
L2_023_000G1_scaffold_443_8
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5043..5252)
DNA (210bp) protein (70aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RTJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX99421.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L2_023_000G1_scaffold_443_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5372..6730)
DNA (1359bp) protein (453aa)
Citrate synthase n=8 Tax=Clostridium RepID=A8RTJ5_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Citrate synthase
L2_023_000G1_scaffold_443_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6861..8039)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RTJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15522.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Uncharacterized protein conserved in bacteria C-term(DUF2220).
L2_023_000G1_scaffold_443_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8075..11467)
DNA (3393bp) protein (1131aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RTJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15521.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
SMC domain-containing protein
L2_023_000G1_scaffold_443_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11452..12285)
DNA (834bp) protein (278aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RTJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15520.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_023_000G1_scaffold_443_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12285..13667)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RTJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15519.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_023_000G1_scaffold_443_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13722..14186)
DNA (465bp) protein (155aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RTJ0_9CLOT
NUDIX hydrolase {ECO:0000313|EMBL:ENZ34455.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
MutT-like (Nudix) hydrolase
L2_023_000G1_scaffold_443_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14272..14943)
DNA (672bp) protein (224aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RTI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15517.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
putative Xre family DNA-binding protein
L2_023_000G1_scaffold_443_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15075..15449)
DNA (375bp) protein (125aa)
MerR family transcriptional regulator n=7 Tax=Clostridium RepID=N9X642_9CLOT
MerR family transcriptional regulator {ECO:0000313|EMBL:ENZ10811.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L2_023_000G1_scaffold_443_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15488..16372)
DNA (885bp) protein (295aa)
Fe-S ferredoxin n=1 Tax=Clostridium bolteae 90B8 RepID=R0ADH6_9CLOT
Fe-S ferredoxin {ECO:0000313|EMBL:ENZ34458.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L2_023_000G1_scaffold_443_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16587..17927
DNA (1341bp) protein (447aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RTI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15514.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
transposase, IS30 family
L2_023_000G1_scaffold_443_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18251..19831)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0ANT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34459.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_023_000G1_scaffold_443_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19949..20707)
DNA (759bp) protein (253aa)
Lysozyme n=1 Tax=Clostridium bolteae 90B8 RepID=N9Z436_9CLOT
Lysozyme {ECO:0000313|EMBL:ENZ34460.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L2_023_000G1_scaffold_443_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20969..22687)
DNA (1719bp) protein (573aa)
Carbon starvation protein CstA n=3 Tax=Clostridium bolteae RepID=N9Z3G4_9CLOT
Carbon starvation protein CstA {ECO:0000313|EMBL:ENZ34461.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
carbon starvation protein CstA
L2_023_000G1_scaffold_443_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23196..24725)
DNA (1530bp) protein (510aa)
uroporphyrin-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RR06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16731.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_023_000G1_scaffold_443_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24742..25650)
DNA (909bp) protein (303aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RR07_9CLOT
porphobilinogen deaminase
L2_023_000G1_scaffold_443_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25643..26368)
DNA (726bp) protein (242aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RR08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16733.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
siroheme synthase
L2_023_000G1_scaffold_443_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26428..27864)
DNA (1437bp) protein (479aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RR10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16735.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_023_000G1_scaffold_443_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28325..30472)
DNA (2148bp) protein (716aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Clostridium bolteae RepID=R0CHA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16738.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
putative signaling protein
L2_023_000G1_scaffold_443_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30636..32159)
DNA (1524bp) protein (508aa)
xylulokinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Clostridium bolteae 90B8 RepID=R0AQV0_9CLOT
Xylulokinase {ECO:0000313|EMBL:ENZ34467.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_023_000G1_scaffold_443_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32163..32819)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0ADI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34468.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
NADPH-dependent FMN reductase
L2_023_000G1_scaffold_443_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32914..33978)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0ANU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34469.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
peptidase M29 aminopeptidase II
L2_023_000G1_scaffold_443_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34000..34962)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9Z445_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34470.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
translation initiation factor IF-2B subunit delta
Displaying items 1-30 of 50 in total

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