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L2_023_000G1_scaffold_491

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_023_000G1_scaffold_491_1
unknown

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1..69
DNA (69bp) protein (23aa)

This feature has no annotations

L2_023_000G1_scaffold_491_2
unknown

Not on your lists

70..201
DNA (132bp) protein (44aa)

This feature has no annotations

L2_023_000G1_scaffold_491_3
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

291..1148
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7GA11_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67494.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_023_000G1_scaffold_491_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1279..1857
DNA (579bp) protein (193aa)
DNA-binding protein n=1 Tax=Clostridium intestinale URNW RepID=U2N3T2_9CLOT
DNA-binding protein {ECO:0000313|EMBL:CEN71961.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
DNA-binding protein
L2_023_000G1_scaffold_491_5
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1962..2249
DNA (288bp) protein (96aa)
Transcriptional regulator n=1 Tax=Clostridium intestinale URNW RepID=U2PR51_9CLOT
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ERK28915.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
L2_023_000G1_scaffold_491_6
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2251..2697
DNA (447bp) protein (149aa)
Membrane protein n=1 Tax=Clostridium intestinale URNW RepID=U2PR56_9CLOT
Membrane protein {ECO:0000313|EMBL:ERK28920.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
membrane protein
L2_023_000G1_scaffold_491_7
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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2713..2919
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DBY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI93843.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L2_023_000G1_scaffold_491_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3023..3388
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QY51_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52348.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_023_000G1_scaffold_491_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3394..3798
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z635_CLOBU
ArsC {ECO:0000313|EMBL:ETI87900.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
protein-tyrosine phosphatase
L2_023_000G1_scaffold_491_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4204..4731
DNA (528bp) protein (176aa)
GNAT family Acetyltransferase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GU52_CLOSY
GNAT family Acetyltransferase {ECO:0000313|EMBL:EGA91704.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_023_000G1_scaffold_491_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4728..5045)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V3J9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07379.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_023_000G1_scaffold_491_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5122..6108)
DNA (987bp) protein (329aa)
UPI0003065413 related cluster n=1 Tax=unknown RepID=UPI0003065413
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG53768.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_023_000G1_scaffold_491_13
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6246..7538
DNA (1293bp) protein (431aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IMF6_THETR
PTS system, lactose/cellobiose family IIC component
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
L2_023_000G1_scaffold_491_14
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7538..9001
DNA (1464bp) protein (488aa)
UPI0002FE6DAA related cluster n=1 Tax=unknown RepID=UPI0002FE6DAA
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EEG53765.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
beta-glucosidase
L2_023_000G1_scaffold_491_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9270..9860)
DNA (591bp) protein (197aa)
Sigma-70 region 2 domain protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWH0_CLOBA
RNA polymerase sigma 70 {ECO:0000313|EMBL:KIL07513.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
sigma-70 region 2 domain-containing protein
L2_023_000G1_scaffold_491_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10135..10662
DNA (528bp) protein (176aa)
Riboflavin biosynthesis protein RibD C-domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J3X8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88729.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
dihydrofolate reductase family protein
L2_023_000G1_scaffold_491_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10734..11516)
DNA (783bp) protein (261aa)
Probable transcriptional regulator n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNL7_CLOPE
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB80022.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_000G1_scaffold_491_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11700..13103
DNA (1404bp) protein (468aa)
Rhamnulokinase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNL6_CLOPE
fucK; rhamnulokinase
Rhamnulokinase {ECO:0000313|EMBL:BAB80023.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_000G1_scaffold_491_19
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13117..13542
DNA (426bp) protein (142aa)
High affinity ribose transport protein rbsD n=1 Tax=Streptococcus mitis SK597 RepID=E1LUY9_STRMT
High affinity ribose transport protein rbsD {ECO:0000313|EMBL:EFN99718.1}; TaxID=585204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis SK597.;"
ribose ABC transporter membrane protein
L2_023_000G1_scaffold_491_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13567..15354
DNA (1788bp) protein (596aa)
L-fucose isomerase {ECO:0000255|HAMAP-Rule:MF_01254}; EC=5.3.1.25 {ECO:0000255|HAMAP-Rule:MF_01254};; 6-deoxy-L-galactose isomerase {ECO:0000255|HAMAP-Rule:MF_01254}; FucIase; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
fucI; L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=FUCI_CLOPE
L2_023_000G1_scaffold_491_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15390..16043
DNA (654bp) protein (218aa)
fucA; L-fuculose phosphate aldolase (EC:4.1.2.17)
L-fuculose-phosphate aldolase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNL4_CLOPE
L-fuculose-phosphate aldolase {ECO:0000313|EMBL:BAB80025.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_000G1_scaffold_491_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16052..16489
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNL3_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80026.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_023_000G1_scaffold_491_23
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16480..16950
DNA (471bp) protein (157aa)
PTS system mannose-specific EIIAB component {ECO:0000313|EMBL:EFN99717.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFN99717.1};; TaxID=585204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis SK597.;"
PTS system sorbose subfamily IIB component n=2 Tax=Streptococcus suis RepID=G7S7K7_STRSU
PTS system sorbose subfamily transporter subunit IIB
L2_023_000G1_scaffold_491_24
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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16986..17771
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHY8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX71563.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
PTS sorbose-specific transporter subunit IIC
L2_023_000G1_scaffold_491_25
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17768..18577
DNA (810bp) protein (270aa)
Mannose-specific phosphotransferase system (PTS), IID component n=1 Tax=Streptococcus suis D9 RepID=G7S7K5_STRSU
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:KEQ43813.1}; TaxID=28037 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis.;"
manN; mannose-specific phosphotransferase system (PTS), IID component
L2_023_000G1_scaffold_491_26
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18626..20932
DNA (2307bp) protein (769aa)
Uncharacterized protein n=2 Tax=Streptococcus suis RepID=B9WT57_STRSU
hypothetical protein
Large secreted protein {ECO:0000313|EMBL:CEO63007.1}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
L2_023_000G1_scaffold_491_27
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20970..23216
DNA (2247bp) protein (749aa)
Glycosyl hydrolase family 98 family protein n=1 Tax=Streptococcus mitis SK597 RepID=E1LUY5_STRMT
Glycosyl hydrolase family 98 family protein {ECO:0000313|EMBL:EFN99714.1}; TaxID=585204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis SK597.;"
putative exported glycosyl hydrolase
L2_023_000G1_scaffold_491_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23231..23659
DNA (429bp) protein (143aa)
lacA; galactose-6-phosphate isomerase subunit LacA (EC:5.3.1.26)
Galactose-6-phosphate isomerase subunit LacA {ECO:0000255|HAMAP-Rule:MF_01555}; EC=5.3.1.26 {ECO:0000255|HAMAP-Rule:MF_01555};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Galactose-6-phosphate isomerase subunit LacA n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=LACA_CLOPE
L2_023_000G1_scaffold_491_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23681..24196
DNA (516bp) protein (172aa)
lacB; galactose-6-phosphate isomerase subunit LacB (EC:5.3.1.26)
Galactose-6-phosphate isomerase subunit LacB {ECO:0000255|HAMAP-Rule:MF_01556}; EC=5.3.1.26 {ECO:0000255|HAMAP-Rule:MF_01556};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Galactose-6-phosphate isomerase subunit LacB n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=LACB_CLOPE
L2_023_000G1_scaffold_491_30
Enterococcus dispar, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24249..25226
DNA (978bp) protein (326aa)
Tagatose 1,6-diphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_00734};; D-tagatose-1,6-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; TaxID=1139219 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus dispar ATCC 51266.;"
tagatose 1,6-diphosphate aldolase (EC:4.1.2.40)
Tagatose 1,6-diphosphate aldolase 2 n=1 Tax=Enterococcus dispar ATCC 51266 RepID=S0KNQ2_9ENTE
Displaying items 1-30 of 57 in total

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